RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 LY6G5CQ5SRR4 150 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 KLHDC10Q6PID8 442 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 IRF2BP1Q8IU81 584 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 SUMF1Q8NBK3 374 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 RBBP8NLQ8NC74 664 aaPredicted RBP19.34■□□□□ 0.69
HOXD11-202ENST00000498438 UBA3Q8TBC4 463 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 KREMEN1Q96MU8 473 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 GBP4Q96PP9 640 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 CLIC5Q9NZA1 410 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 DNMT3LQ9UJW3 386 aa19.34■□□□□ 0.69
HOXD11-202ENST00000498438 CHURC1-FNTBB4DL54 471 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 RNF225M0QZC1 329 aaPredicted RBP19.33■□□□□ 0.68
HOXD11-202ENST00000498438 GREM1O60565 184 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 ZBED1O96006 694 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 CALCAP01258 141 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 SETSIPP0DME0 302 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 BRD2P25440 801 aaKnown RBP19.33■□□□□ 0.68
HOXD11-202ENST00000498438 HOXC13P31276 330 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 PLA2G4AP47712 749 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 FNTBP49356 437 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 ZNF132P52740 706 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 GOLGA8FQ08AF8 430 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 GOLGA8DPQ0D2H9 430 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 PKDCCQ504Y2 493 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 LCLAT1Q6UWP7 414 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 HTR3DQ70Z44 454 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 TADA2BQ86TJ2 420 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 C12orf40Q86WS4 652 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 RPLP0P6Q8NHW5 317 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 CDK5RAP1Q96SZ6 601 aaKnown RBP19.33■□□□□ 0.68
HOXD11-202ENST00000498438 ZSWIM1Q9BR11 485 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 CRACR2AQ9BSW2 395 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 ULBP1Q9BZM6 244 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 EPC1Q9H2F5 836 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 ZNF292O60281 2723 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 FRYLO94915 3013 aa19.33■□□□□ 0.68
HOXD11-202ENST00000498438 M0QYV0 167 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 ATG13O75143 517 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 SLC6A11P48066 632 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 YWHAGP61981 247 aaKnown RBP eCLIP19.32■□□□□ 0.68
HOXD11-202ENST00000498438 ADIGQ0VDE8 80 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 HEATR6Q6AI08 1181 aaKnown RBP19.32■□□□□ 0.68
HOXD11-202ENST00000498438 MIB1Q86YT6 1006 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 ARHGAP18Q8N392 663 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 ZNF276Q8N554 614 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 LRRC4Q9HBW1 653 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 SPHK2Q9NRA0 654 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 POLR3BQ9NW08 1133 aaPredicted RBP19.32■□□□□ 0.68
HOXD11-202ENST00000498438 DACH1Q9UI36 760 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 RASAL2Q9UJF2 1139 aa19.32■□□□□ 0.68
HOXD11-202ENST00000498438 LSM7Q9UK45 103 aaKnown RBP19.32■□□□□ 0.68
HOXD11-202ENST00000498438 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.32■□□□□ 0.68
HOXD11-202ENST00000498438 SMG5Q9UPR3 1016 aaKnown RBP19.32■□□□□ 0.68
HOXD11-202ENST00000498438 EIF2DP41214 584 aaKnown RBP19.31■□□□□ 0.68
HOXD11-202ENST00000498438 MTIF2P46199 727 aaKnown RBP19.31■□□□□ 0.68
HOXD11-202ENST00000498438 SEC13P55735 322 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 GAD2Q05329 585 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 KDSRQ06136 332 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 MESP2Q0VG99 397 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 EFEMP1Q12805 493 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 STILQ15468 1287 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 PM20D1Q6GTS8 502 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 TRIM65Q6PJ69 517 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 BHLHA9Q7RTU4 235 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 SIX6OS1Q8N1H7 587 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 NDRG1Q92597 394 aaKnown RBP19.31■□□□□ 0.68
HOXD11-202ENST00000498438 IPO9Q96P70 1041 aaKnown RBP19.31■□□□□ 0.68
HOXD11-202ENST00000498438 THAP9Q9H5L6 903 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 UBE2TQ9NPD8 197 aaPredicted RBP19.31■□□□□ 0.68
HOXD11-202ENST00000498438 SLC8A2Q9UPR5 921 aa19.31■□□□□ 0.68
HOXD11-202ENST00000498438 K7EQS6 105 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 HOXC11O43248 304 aaPredicted RBP19.3■□□□□ 0.68
HOXD11-202ENST00000498438 STC2O76061 302 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 KRT5P13647 590 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 ERCC5P28715 1186 aaPredicted RBP19.3■□□□□ 0.68
HOXD11-202ENST00000498438 HOXA6P31267 233 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 RGS7P49802 495 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 CNGA2Q16280 664 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 ANO4Q32M45 955 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 GJB7Q6PEY0 223 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 GBP6Q6ZN66 633 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 Q6ZNB5 142 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 RSRC2Q7L4I2 434 aaKnown RBP19.3■□□□□ 0.68
HOXD11-202ENST00000498438 LONP2Q86WA8 852 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 TMEM25Q86YD3 366 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 SFTPA1Q8IWL2 248 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 GPT2Q8TD30 523 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 KCTD13Q8WZ19 329 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 SECISBP2LQ93073 1101 aaKnown RBP19.3■□□□□ 0.68
HOXD11-202ENST00000498438 ACDQ96AP0 544 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 PNKPQ96T60 521 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 HINFPQ9BQA5 517 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 CNTN6Q9UQ52 1028 aa19.3■□□□□ 0.68
HOXD11-202ENST00000498438 ANTXRLA6NF34 631 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.29■□□□□ 0.68
HOXD11-202ENST00000498438 KAT7O95251 611 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 APODP05090 189 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 LCP1P13796 627 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 SLC9A1P19634 815 aa19.29■□□□□ 0.68
HOXD11-202ENST00000498438 APBA1Q02410 837 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms