RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 HSPA12BQ96MM6 686 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 MED10Q9BTT4 135 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 SDCBP2Q9H190 292 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 TNMDQ9H2S6 317 aa17.02■□□□□ 0.32
MUC1-220ENST00000498431 DNAJC17Q9NVM6 304 aaKnown RBP17.02■□□□□ 0.32
MUC1-220ENST00000498431 MORC2Q9Y6X9 1032 aaPredicted RBP17.02■□□□□ 0.32
MUC1-220ENST00000498431 FAM92AA1XBS5 289 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 PRRT4C9JH25 899 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 BEST1O76090 585 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 TBX18O95935 607 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 CAPNS1P04632 268 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 PDCP20941 246 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 TUBP50607 506 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 FAM26FQ5R3K3 315 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 GRAMD4Q6IC98 578 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 SCARA5Q6ZMJ2 495 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 TOGARAM2Q6ZUX3 1019 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 FUKQ8N0W3 1084 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 TRIML1Q8N9V2 468 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 XXYLT1Q8NBI6 393 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 IPO4Q8TEX9 1081 aaKnown RBP17.01■□□□□ 0.31
MUC1-220ENST00000498431 SCFD1Q8WVM8 642 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 SMOQ99835 787 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 DUSP9Q99956 384 aaKnown RBP17.01■□□□□ 0.31
MUC1-220ENST00000498431 DMAP1Q9NPF5 467 aaPredicted RBP17.01■□□□□ 0.31
MUC1-220ENST00000498431 KRT82Q9NSB4 513 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 STARD13Q9Y3M8 1113 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 RAD54BQ9Y620 910 aa17.01■□□□□ 0.31
MUC1-220ENST00000498431 FAM221BA6H8Z2 402 aa17■□□□□ 0.31
MUC1-220ENST00000498431 NEDD8-MDP1E9PL57 170 aa17■□□□□ 0.31
MUC1-220ENST00000498431 GJB3O75712 270 aa17■□□□□ 0.31
MUC1-220ENST00000498431 AP1G2O75843 785 aa17■□□□□ 0.31
MUC1-220ENST00000498431 CCDC130P13994 396 aa17■□□□□ 0.31
MUC1-220ENST00000498431 CASP1P29466 404 aa17■□□□□ 0.31
MUC1-220ENST00000498431 ORC1Q13415 861 aa17■□□□□ 0.31
MUC1-220ENST00000498431 RAB44Q7Z6P3 723 aaPredicted RBP17■□□□□ 0.31
MUC1-220ENST00000498431 ACOT1Q86TX2 421 aa17■□□□□ 0.31
MUC1-220ENST00000498431 CHPFQ8IZ52 775 aa17■□□□□ 0.31
MUC1-220ENST00000498431 SYAP1Q96A49 352 aaPredicted RBP17■□□□□ 0.31
MUC1-220ENST00000498431 P2RY11Q96G91 374 aa17■□□□□ 0.31
MUC1-220ENST00000498431 SMARCD1Q96GM5 515 aa17■□□□□ 0.31
MUC1-220ENST00000498431 SMG1Q96Q15 3661 aaKnown RBP17■□□□□ 0.31
MUC1-220ENST00000498431 DNAAF2Q9NVR5 837 aaKnown RBP17■□□□□ 0.31
MUC1-220ENST00000498431 ATP8B3O60423 1300 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 MYH10P35580 1976 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 WASH3PC4AMC7 463 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 H0Y626 953 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 SH3BP5O60239 455 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 CACNG3O60359 315 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 TLR5O60602 858 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 TRIM16O95361 564 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 TYRP14679 529 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 ATICP31939 592 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 NASPP49321 788 aaPredicted RBP16.99■□□□□ 0.31
MUC1-220ENST00000498431 EHHADHQ08426 723 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 ZNF699Q32M78 642 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 PREPLQ4J6C6 727 aaPredicted RBP16.99■□□□□ 0.31
MUC1-220ENST00000498431 TPGS1Q6ZTW0 290 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 HTR3DQ70Z44 454 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 DHX58Q96C10 678 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 GABRG3Q99928 467 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 BBS2Q9BXC9 721 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 KLF16Q9BXK1 252 aaPredicted RBP16.99■□□□□ 0.31
MUC1-220ENST00000498431 NACA2Q9H009 215 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 VRTNQ9H8Y1 702 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 OSER1Q9NX31 292 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 CACNA2D2Q9NY47 1150 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 HMGXB4Q9UGU5 601 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 MTMR6Q9Y217 621 aa16.99■□□□□ 0.31
MUC1-220ENST00000498431 A0A1W2PQD8 194 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 PHACTR2O75167 634 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 ZNF217O75362 1048 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 VNN1O95497 513 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 MAOBP27338 520 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 BIRC3Q13489 604 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 ACAP1Q15027 740 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 CNNM4Q6P4Q7 775 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 NUDT18Q6ZVK8 323 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 GPRIN1Q7Z2K8 1008 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 RABEPKQ7Z6M1 372 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 PROSER1Q86XN7 944 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 LINC00301Q8NCQ3 95 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 BHMTQ93088 406 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 ZNF419Q96HQ0 510 aaPredicted RBP16.98■□□□□ 0.31
MUC1-220ENST00000498431 TNIP3Q96KP6 325 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 MRGPRX1Q96LB2 322 aa16.98■□□□□ 0.31
MUC1-220ENST00000498431 UBE4BO95155 1302 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 IGSF10Q6WRI0 2623 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 LRRIQ3A6PVS8 624 aaPredicted RBP16.97■□□□□ 0.31
MUC1-220ENST00000498431 MDM4O15151 490 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 CLSTN1O94985 981 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 SYPP08247 313 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 CISD3P0C7P0 127 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 MAP3K7CLP57077 242 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 STK38Q15208 465 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 TRIP6Q15654 476 aaKnown RBP16.97■□□□□ 0.31
MUC1-220ENST00000498431 ZNF423Q2M1K9 1284 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 PLEKHG6Q3KR16 790 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 ZNF667Q5HYK9 610 aa16.97■□□□□ 0.31
MUC1-220ENST00000498431 RGL4Q8IZJ4 473 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms