RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 KLF16Q9BXK1 252 aaPredicted RBP8.93□□□□□ -0.98
HMGXB4-207ENST00000498212 NMUR1Q9HB89 426 aa8.93□□□□□ -0.98
HMGXB4-207ENST00000498212 POLR3BQ9NW08 1133 aaPredicted RBP8.93□□□□□ -0.98
HMGXB4-207ENST00000498212 OSER1Q9NX31 292 aa8.93□□□□□ -0.98
HMGXB4-207ENST00000498212 NAGPAQ9UK23 515 aa8.93□□□□□ -0.98
HMGXB4-207ENST00000498212 USP18Q9UMW8 372 aa8.93□□□□□ -0.98
HMGXB4-207ENST00000498212 CTNND2Q9UQB3 1225 aa8.93□□□□□ -0.98
HMGXB4-207ENST00000498212 PTPRZ1P23471 2315 aaPredicted RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 OTOGLQ3ZCN5 2332 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 TNRC6BQ9UPQ9 1833 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 PPP1R3GB7ZBB8 358 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 HOXC11O43248 304 aaPredicted RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 LRP3O75074 770 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 RPP40O75818 363 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 KAT7O95251 611 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 APBB3O95704 486 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 RETP07949 1114 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 RALAP11233 206 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 RARGP13631 454 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 MRPS21P82921 87 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 KDSRQ06136 332 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 SPEM2Q0P670 501 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 LRMPQ12912 555 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 MORC3Q14149 939 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 GOLGA7BQ2TAP0 167 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 ANO4Q32M45 955 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 PREPLQ4J6C6 727 aaPredicted RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 C2orf27AQ580R0 203 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 KLHDC10Q6PID8 442 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 FOXR2Q6PJQ5 311 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 HTR3DQ70Z44 454 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 TADA2BQ86TJ2 420 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 FAM160A2Q8N612 972 aaPredicted RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 ANKRD52Q8NB46 1076 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 USP33Q8TEY7 942 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 WBP2Q969T9 261 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 RMDN1Q96DB5 314 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 UBXN6Q9BZV1 441 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 ARHGEF4Q9NR80 690 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 SPHK2Q9NRA0 654 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 DNMT3LQ9UJW3 386 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 LSM7Q9UK45 103 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 NUDT5Q9UKK9 219 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 MMP17Q9ULZ9 603 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 USP3Q9Y6I4 520 aa8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 RIF1Q5UIP0 2472 aaKnown RBP8.92□□□□□ -0.98
HMGXB4-207ENST00000498212 A0A0A0MRY4 1105 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 ANTXRLA6NF34 631 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 NEDD8-MDP1E9PL57 170 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 MDM4O15151 490 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 AXIN1O15169 862 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 PMM2O15305 246 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 P4HA2O15460 535 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 GREM1O60565 184 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 GNA14O95837 355 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 VDRP11473 427 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 CD19P15391 556 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 TGM1P22735 817 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 GRIA2P42262 883 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 PLA2G4AP47712 749 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 DGKEP52429 567 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 BCAT1P54687 386 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 STX17P56962 302 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 UBE2HP62256 183 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 LMNB2Q03252 620 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 MESP2Q0VG99 397 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 BST2Q10589 180 aaKnown RBP8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 CETN1Q12798 172 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 PAK1Q13153 545 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 PUM1Q14671 1186 aaKnown RBP eCLIP8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 SGO2Q562F6 1265 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 RAB41Q5JT25 222 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 C10orf120Q5SQS8 335 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 NUDT18Q6ZVK8 323 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 ERMP1Q7Z2K6 904 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 CACNA2D4Q7Z3S7 1137 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 SCD5Q86SK9 330 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 PIGZQ86VD9 579 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 TTC30AQ86WT1 665 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 TMEM25Q86YD3 366 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 MIB1Q86YT6 1006 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 SFTPA1Q8IWL2 248 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 ETFBKMTQ8IXQ9 262 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 ARHGAP18Q8N392 663 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 PHTF2Q8N3S3 785 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 ZNF276Q8N554 614 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 CCDC33Q8N5R6 958 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 NAT16Q8N8M0 369 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 TRIML1Q8N9V2 468 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 TSTD1Q8NFU3 115 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 MARVELD3Q96A59 401 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 NT5C1BQ96P26 610 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 CDK5RAP1Q96SZ6 601 aaKnown RBP8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 PARD6AQ9NPB6 346 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 SEMA4GQ9NTN9 838 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 CLIC5Q9NZA1 410 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 CHMP5Q9NZZ3 219 aa8.91□□□□□ -0.98
HMGXB4-207ENST00000498212 HESX1Q9UBX0 185 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms