RNA–Protein interactions for RNA: ENST00000498117.1

TRIM27-207, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-207ENST00000498117 ZFRQ96KR1 1074 aaKnown RBP13.44□□□□□ -0.26
TRIM27-207ENST00000498117 ACCSQ96QU6 501 aa13.44□□□□□ -0.26
TRIM27-207ENST00000498117 GPR174Q9BXC1 333 aa13.44□□□□□ -0.26
TRIM27-207ENST00000498117 MTMR12Q9C0I1 747 aa13.44□□□□□ -0.26
TRIM27-207ENST00000498117 CD93Q9NPY3 652 aa13.44□□□□□ -0.26
TRIM27-207ENST00000498117 ITM2CQ9NQX7 267 aa13.44□□□□□ -0.26
TRIM27-207ENST00000498117 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
TRIM27-207ENST00000498117 METTL12A8MUP2 240 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 PRRT4C9JH25 899 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 CACNG3O60359 315 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 PPP1R37O75864 691 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 HLA-EP13747 358 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 GARTP22102 1010 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 OXTRP30559 389 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 GNL1P36915 607 aaPredicted RBP13.43□□□□□ -0.26
TRIM27-207ENST00000498117 STARD3Q14849 445 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 DCAF12L1Q5VU92 463 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 LRRC69Q6ZNQ3 347 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 ZSWIM2Q8NEG5 633 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 RASSF8Q8NHQ8 419 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 FAM84AQ96KN4 292 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 ZSCAN31Q96LW9 406 aaPredicted RBP13.43□□□□□ -0.26
TRIM27-207ENST00000498117 MMS19Q96T76 1030 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 ELOVL4Q9GZR5 314 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 SNX25Q9H3E2 840 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 PRORYQ9H606 182 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 PDE11AQ9HCR9 933 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 USP36Q9P275 1121 aaKnown RBP13.43□□□□□ -0.26
TRIM27-207ENST00000498117 WDR35Q9P2L0 1181 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 CHORDC1Q9UHD1 332 aaPredicted RBP13.43□□□□□ -0.26
TRIM27-207ENST00000498117 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRIM27-207ENST00000498117 RAI2Q9Y5P3 530 aa13.43□□□□□ -0.26
TRIM27-207ENST00000498117 NEDD8-MDP1E9PL57 170 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 CAPN9O14815 690 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 FAM163BP0C2L3 166 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 TYRP14679 529 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 TUBP50607 506 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 ZNF132P52740 706 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 BNC1Q01954 994 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 KCNA1Q09470 495 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 SNX30Q5VWJ9 437 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 MCTP1Q6DN14 999 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 SFR1Q86XK3 245 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 LARP4BQ92615 738 aaKnown RBP13.42□□□□□ -0.26
TRIM27-207ENST00000498117 STRA6Q9BX79 667 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 BBS2Q9BXC9 721 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 NACA2Q9H009 215 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 MRPL44Q9H9J2 332 aaKnown RBP13.42□□□□□ -0.26
TRIM27-207ENST00000498117 INTS13Q9NVM9 706 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 SEL1LQ9UBV2 794 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 ZNF462Q96JM2 2506 aa13.42□□□□□ -0.26
TRIM27-207ENST00000498117 A0A1B0GVT2 93 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 GOLGA8IPA6NC78 632 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 CAPN8A6NHC0 703 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 GOLGA8JA6NMD2 632 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 WASH3PC4AMC7 463 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 TACC1O75410 805 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 TNNC2P02585 160 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 IRF1P10914 325 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 PTPN1P18031 435 aaKnown RBP13.41□□□□□ -0.26
TRIM27-207ENST00000498117 ITPKBP27987 946 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 DDIT3P35638 169 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 DGKGP49619 791 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 SURF1Q15526 300 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 PTPRNQ16849 979 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 DUOXA2Q1HG44 320 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 FUT11Q495W5 492 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 L1TD1Q5T7N2 865 aaKnown RBP13.41□□□□□ -0.26
TRIM27-207ENST00000498117 HTR3DQ70Z44 454 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 TMPRSS12Q86WS5 348 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 SYCP3Q8IZU3 236 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 ZNF843Q8N446 348 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 OR6B3Q8NGW1 331 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 NOC3LQ8WTT2 800 aaKnown RBP13.41□□□□□ -0.26
TRIM27-207ENST00000498117 NUP58Q9BVL2 599 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 ZNF518BQ9C0D4 1074 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 CCSER2Q9H7U1 834 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.41□□□□□ -0.262e-31■■■■■ 124.2
TRIM27-207ENST00000498117 MARK1Q9P0L2 795 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 EIF2B4Q9UI10 523 aaKnown RBP13.41□□□□□ -0.26
TRIM27-207ENST00000498117 BTBD3Q9Y2F9 522 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 PCDHB13Q9Y5F0 798 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 STON1Q9Y6Q2 735 aa13.41□□□□□ -0.26
TRIM27-207ENST00000498117 PLK4O00444 970 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 NPC1O15118 1278 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 RRP8O43159 456 aaKnown RBP13.4□□□□□ -0.26
TRIM27-207ENST00000498117 EIF2S3P41091 472 aaKnown RBP13.4□□□□□ -0.26
TRIM27-207ENST00000498117 GRK6P43250 576 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 TPMTP51580 245 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 AFF3P51826 1226 aaKnown RBP13.4□□□□□ -0.26
TRIM27-207ENST00000498117 CACNA2D1P54289 1103 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 CCDC157Q569K6 752 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 TPGS1Q6ZTW0 290 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 TMPRSS6Q8IU80 811 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 C1orf216Q8TAB5 229 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 WBP2Q969T9 261 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 NXPE2Q96DL1 559 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 SIPA1Q96FS4 1042 aa13.4□□□□□ -0.26
TRIM27-207ENST00000498117 MRPL45Q9BRJ2 306 aaKnown RBP13.4□□□□□ -0.26
TRIM27-207ENST00000498117 MKRN2Q9H000 416 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms