RNA–Protein interactions for RNA: ENST00000497871.1

ATPAF2-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-209ENST00000497871 HLA-DRAP01903 254 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 IRF1P10914 325 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 IRX4P78413 519 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 INCA1Q0VD86 236 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 NFIL3Q16649 462 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 MAP7D1Q3KQU3 841 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 PSAPL1Q6NUJ1 521 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 PGBD3Q8N328 593 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 ZNF513Q8N8E2 541 aaPredicted RBP19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 TERB1Q8NA31 727 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 HMGB4Q8WW32 186 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 CYFIP2Q96F07 1278 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 NT5C1AQ9BXI3 368 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 CYP3A43Q9HB55 503 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 TMEM9BQ9NQ34 198 aa19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 EVLQ9UI08 416 aaPredicted RBP19.25■□□□□ 0.67
ATPAF2-209ENST00000497871 KMT2BQ9UMN6 2715 aaPredicted RBP19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 KIAA1549LQ6ZVL6 1849 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 TCRBV21S2A2A0A5A6 115 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 PATE3B3GLJ2 98 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 CDX4O14627 284 aaPredicted RBP19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 ADORA2BP29275 332 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 PIK3CAP42336 1068 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 ENPEPQ07075 957 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 GOLGA8FQ08AF8 430 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 GOLGA8DPQ0D2H9 430 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 C10orf76Q5T2E6 689 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 KLHDC10Q6PID8 442 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 CLEC20AQ6ZU45 233 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 INTS8Q75QN2 995 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 TMEFF1Q8IYR6 380 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 FRMD1Q8N878 549 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 SPRYD3Q8NCJ5 442 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 CCDC47Q96A33 483 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 XPO6Q96QU8 1125 aaKnown RBP19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 IMPG2Q9BZV3 1241 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 PNPLA8Q9NP80 782 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 WDR35Q9P2L0 1181 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 MBD1Q9UIS9 605 aaPredicted RBP19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 PCDHA5Q9Y5H7 936 aa19.24■□□□□ 0.67
ATPAF2-209ENST00000497871 HHLA1C9JL84 531 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 RHOBTB3O94955 611 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 ACO1P21399 889 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 NR2F2P24468 414 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 NTSR1P30989 418 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 DPP6P42658 865 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 SYKP43405 635 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 GCLMP48507 274 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 NOVA1P51513 510 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 LMAN2Q12907 356 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 GRAMD4Q6IC98 578 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 GPRIN1Q7Z2K8 1008 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 SYT12Q8IV01 421 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 SPATA32Q96LK8 384 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 TWNKQ96RR1 684 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 DNAI2Q9GZS0 605 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 APOBEC3GQ9HC16 384 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 OSER1Q9NX31 292 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 MARK1Q9P0L2 795 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 LSM7Q9UK45 103 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 HCN2Q9UL51 889 aa19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 MAP1BP46821 2468 aaKnown RBP19.23■□□□□ 0.67
ATPAF2-209ENST00000497871 LAMA1P25391 3075 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 MYOFQ9NZM1 2061 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 FAM237AA0A1B0GTK4 181 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 TRIM24O15164 1050 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 CSRP1P21291 193 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 RPL13P26373 211 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 PTGER3P43115 390 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 PLA2G4AP47712 749 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 PPP3CAQ08209 521 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 TRIM61Q5EBN2 209 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 SDE2Q6IQ49 451 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 ZNF276Q8N554 614 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 TAS1R2Q8TE23 839 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 BBS2Q9BXC9 721 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 NMUR1Q9HB89 426 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 TMEM74BQ9NUR3 256 aa19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 DNAJC17Q9NVM6 304 aaKnown RBP19.22■□□□□ 0.67
ATPAF2-209ENST00000497871 NEDD8-MDP1E9PL57 170 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 GIPC1O14908 333 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 ZBTB24O43167 697 aaPredicted RBP19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 CYP26A1O43174 497 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 CACNG3O60359 315 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 CILPO75339 1184 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 RARGP13631 454 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 KRT13P13646 458 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 CEACAM1P13688 526 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 HOXB2P14652 356 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 TYRP14679 529 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 PSMC2P35998 433 aaKnown RBP19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 PSEN1P49768 467 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 KIF11P52732 1056 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 MCCD1P59942 119 aaPredicted RBP19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 KRT85P78386 507 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 SH3PXD2AQ5TCZ1 1133 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 LYSMD4Q5XG99 296 aa19.21■□□□□ 0.67
ATPAF2-209ENST00000497871 ARMCX6Q7L4S7 300 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms