RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 METTL3Q86U44 580 aaKnown RBP17.5■□□□□ 0.39
VIM-208ENST00000497849 SFR1Q86XK3 245 aa17.5■□□□□ 0.39
VIM-208ENST00000497849 CALML4Q96GE6 196 aa17.5■□□□□ 0.39
VIM-208ENST00000497849 HPDLQ96IR7 371 aa17.5■□□□□ 0.39
VIM-208ENST00000497849 AK8Q96MA6 479 aa17.5■□□□□ 0.39
VIM-208ENST00000497849 GPR174Q9BXC1 333 aa17.5■□□□□ 0.39
VIM-208ENST00000497849 TRIM9Q9C026 710 aa17.5■□□□□ 0.39
VIM-208ENST00000497849 MIR1-1HGQ9H1L0 117 aa17.5■□□□□ 0.39
VIM-208ENST00000497849 PRORYQ9H606 182 aa17.5■□□□□ 0.39
VIM-208ENST00000497849 USP36Q9P275 1121 aaKnown RBP17.5■□□□□ 0.39
VIM-208ENST00000497849 PTPRJQ12913 1337 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 GOLGA8IPA6NC78 632 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 GOLGA8JA6NMD2 632 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 KCNJ18B7U540 433 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 BCAT2O15382 392 aaPredicted RBP17.49■□□□□ 0.39
VIM-208ENST00000497849 CACNG3O60359 315 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 TMEM191BP0C7N4 346 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 YWHAQP27348 245 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 UBA7P41226 1012 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 MYO1EQ12965 1108 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 PTPRNQ16849 979 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 DCAF12L1Q5VU92 463 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 IL27RAQ6UWB1 636 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 HS2ST1Q7LGA3 356 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 CADM4Q8NFZ8 388 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 OR5B17Q8NGF7 314 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 C1orf216Q8TAB5 229 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 MRPL45Q9BRJ2 306 aaKnown RBP17.49■□□□□ 0.39
VIM-208ENST00000497849 ZNF518BQ9C0D4 1074 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 CCSER2Q9H7U1 834 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 ITM2CQ9NQX7 267 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 CHORDC1Q9UHD1 332 aaPredicted RBP17.49■□□□□ 0.39
VIM-208ENST00000497849 RAI2Q9Y5P3 530 aa17.49■□□□□ 0.39
VIM-208ENST00000497849 GREM1O60565 184 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 CD2BP2O95400 341 aaKnown RBP17.48■□□□□ 0.39
VIM-208ENST00000497849 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
VIM-208ENST00000497849 HECTD3Q5T447 861 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 SNX30Q5VWJ9 437 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 ZNF605Q86T29 641 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 NUP93Q8N1F7 819 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 ZNF843Q8N446 348 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 PDZD8Q8NEN9 1154 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 SCFD1Q8WVM8 642 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 OVCA2Q8WZ82 227 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 FBXO32Q969P5 355 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 MKRN2Q9H000 416 aaKnown RBP17.48■□□□□ 0.39
VIM-208ENST00000497849 INTS13Q9NVM9 706 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.48■□□□□ 0.39
VIM-208ENST00000497849 SLCO1B1Q9Y6L6 691 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 MYO18BQ8IUG5 2567 aa17.48■□□□□ 0.39
VIM-208ENST00000497849 MGAQ8IWI9 3026 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 A0A1B0GVT2 93 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 METTL12A8MUP2 240 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 NEDD8-MDP1E9PL57 170 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 GFRA2O00451 464 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 CISD3P0C7P0 127 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 IRF1P10914 325 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 TYRP14679 529 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 GARTP22102 1010 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 FUT11Q495W5 492 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 LSM14AQ8ND56 463 aaKnown RBP17.47■□□□□ 0.39
VIM-208ENST00000497849 LARP4BQ92615 738 aaKnown RBP17.47■□□□□ 0.39
VIM-208ENST00000497849 XPO6Q96QU8 1125 aaKnown RBP17.47■□□□□ 0.39
VIM-208ENST00000497849 CBWD1Q9BRT8 395 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 ELOVL4Q9GZR5 314 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 DPEP3Q9H4B8 488 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 MARK1Q9P0L2 795 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 EIF2B4Q9UI10 523 aaKnown RBP17.47■□□□□ 0.39
VIM-208ENST00000497849 MYH10P35580 1976 aa17.47■□□□□ 0.39
VIM-208ENST00000497849 E9PAM4 449 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 CLDN5O00501 218 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 TNFSF14O43557 240 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 ZDHHC11BP0C7U3 371 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 PTPN1P18031 435 aaKnown RBP17.46■□□□□ 0.39
VIM-208ENST00000497849 DDIT3P35638 169 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 GNL1P36915 607 aaPredicted RBP17.46■□□□□ 0.39
VIM-208ENST00000497849 EIF2S3P41091 472 aaKnown RBP17.46■□□□□ 0.39
VIM-208ENST00000497849 TUBP50607 506 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 TPMTP51580 245 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 GRIN1Q05586 938 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 NUMA1Q14980 2115 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 L1TD1Q5T7N2 865 aaKnown RBP17.46■□□□□ 0.39
VIM-208ENST00000497849 LARP1BQ659C4 914 aaKnown RBP17.46■□□□□ 0.39
VIM-208ENST00000497849 DHRS13Q6UX07 377 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 DYMQ7RTS9 669 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 KRI1Q8N9T8 703 aaKnown RBP17.46■□□□□ 0.39
VIM-208ENST00000497849 SCAMP5Q8TAC9 235 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 ANKRD36BP1Q96IX9 119 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 ACCSQ96QU6 501 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 KCNK16Q96T55 309 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 MMS19Q96T76 1030 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 BBS2Q9BXC9 721 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 B3GNT5Q9BYG0 378 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 MRPL44Q9H9J2 332 aaKnown RBP17.46■□□□□ 0.39
VIM-208ENST00000497849 EXOC7Q9UPT5 735 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 STON1Q9Y6Q2 735 aa17.46■□□□□ 0.39
VIM-208ENST00000497849 ATMQ13315 3056 aa17.46■□□□□ 0.38
VIM-208ENST00000497849 PLK4O00444 970 aa17.45■□□□□ 0.38
VIM-208ENST00000497849 TLX3O43711 291 aaPredicted RBP17.45■□□□□ 0.38
VIM-208ENST00000497849 RTN3O95197 1032 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms