RNA–Protein interactions for RNA: ENST00000496569.1

HDLBP-246, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-246ENST00000496569 SGO2Q562F6 1265 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 PRR23BQ6ZRT6 265 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 BHLHA9Q7RTU4 235 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 CCDC186Q7Z3E2 898 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 TMEM25Q86YD3 366 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 TRIML1Q8N9V2 468 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 RBBP8NLQ8NC74 664 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-246ENST00000496569 BHMTQ93088 406 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 IER2Q9BTL4 223 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 PNPLA8Q9NP80 782 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 ACP6Q9NPH0 428 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 CYLDQ9NQC7 956 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 LMBRD1Q9NUN5 540 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 RWDD2AQ9UIY3 292 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 AJAP1Q9UKB5 411 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-246ENST00000496569 USP3Q9Y6I4 520 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 CEP192Q8TEP8 1941 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 GON4LQ3T8J9 2241 aa12.85□□□□□ -0.35
HDLBP-246ENST00000496569 E2F8A0AVK6 867 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 K7EQS6 105 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 DRD1P21728 446 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 TBXAS1P24557 533 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-246ENST00000496569 ATP5C1P36542 298 aaKnown RBP12.84□□□□□ -0.35
HDLBP-246ENST00000496569 BCAT1P54687 386 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
HDLBP-246ENST00000496569 YWHAEP62258 255 aaKnown RBP12.84□□□□□ -0.35
HDLBP-246ENST00000496569 EFEMP1Q12805 493 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 NR1H3Q13133 447 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 C2orf27AQ580R0 203 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 RAB41Q5JT25 222 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 EMC10Q5UCC4 262 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 FOXR2Q6PJQ5 311 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 TPGS1Q6ZTW0 290 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 DDX42Q86XP3 938 aaKnown RBP eCLIP12.84□□□□□ -0.35
HDLBP-246ENST00000496569 KIAA2013Q8IYS2 634 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 TTC39CQ8N584 583 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 CCDC33Q8N5R6 958 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 ANKRD52Q8NB46 1076 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 EHBP1Q8NDI1 1231 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 ERLEC1Q96DZ1 483 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 FAXDC2Q96IV6 333 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 NUP62CLQ9H1M0 184 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 EPC1Q9H2F5 836 aa12.84□□□□□ -0.35
HDLBP-246ENST00000496569 M0QYV0 167 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 SLC9A3R1O14745 358 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-246ENST00000496569 XPO1O14980 1071 aaKnown RBP12.83□□□□□ -0.36
HDLBP-246ENST00000496569 PMM2O15305 246 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 STC2O76061 302 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 PAPSS2O95340 614 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-246ENST00000496569 CCDC192P0DO97 292 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 CHRM1P11229 460 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-246ENST00000496569 VDRP11473 427 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 LCP1P13796 627 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 HNRNPLP14866 589 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDLBP-246ENST00000496569 SLC9A1P19634 815 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 TIE1P35590 1138 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDLBP-246ENST00000496569 AMPD2Q01433 879 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 BST2Q10589 180 aaKnown RBP12.83□□□□□ -0.36
HDLBP-246ENST00000496569 ANO4Q32M45 955 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 PKDCCQ504Y2 493 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 MAMSTRQ6ZN01 415 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 PHTF2Q8N3S3 785 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 SYNPOQ8N3V7 929 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 CLEC4CQ8WTT0 213 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 EDEM1Q92611 657 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 SECISBP2LQ93073 1101 aaKnown RBP12.83□□□□□ -0.36
HDLBP-246ENST00000496569 SPHK2Q9NRA0 654 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 PLK2Q9NYY3 685 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 NCDNQ9UBB6 729 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 HESX1Q9UBX0 185 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 SPTBN2O15020 2390 aa12.83□□□□□ -0.36
HDLBP-246ENST00000496569 FAM170AA1A519 330 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 NEDD8-MDP1E9PL57 170 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 P4HA2O15460 535 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 GNA14O95837 355 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 ADH1CP00326 375 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 KLKB1P03952 638 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 PNMA6AP0CW24 399 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-246ENST00000496569 KRT5P13647 590 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 MTIF2P46199 727 aaKnown RBP12.82□□□□□ -0.36
HDLBP-246ENST00000496569 ZNF132P52740 706 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 DMC1Q14565 340 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 PPP2R5DQ14738 602 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 ARHGAP44Q17R89 818 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 PMF1Q6P1K2 205 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 LONP2Q86WA8 852 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 ETFBKMTQ8IXQ9 262 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 ALLCQ8N6M5 410 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 GPT2Q8TD30 523 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 USP33Q8TEY7 942 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 RUBCNQ92622 972 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 PNKPQ96T60 521 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 TPSD1Q9BZJ3 242 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 DNAI2Q9GZS0 605 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 SEMA4AQ9H3S1 761 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 LRRC4Q9HBW1 653 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 PARD6AQ9NPB6 346 aa12.82□□□□□ -0.36
HDLBP-246ENST00000496569 UBE2TQ9NPD8 197 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-246ENST00000496569 ARHGEF4Q9NR80 690 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms