RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 NFATC1O95644 943 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 ZBED1O96006 694 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 EGFP01133 1207 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 HMBSP08397 361 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 SETSIPP0DME0 302 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 ATP5C1P36542 298 aaKnown RBP18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 RPS9P46781 194 aaKnown RBP18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 KLK7P49862 253 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 SLC8A3P57103 927 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 YWHAGP61981 247 aaKnown RBP eCLIP18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 EFEMP1Q12805 493 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 CNGA2Q16280 664 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 CT47A1Q5JQC4 288 aaPredicted RBP18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 C12orf40Q86WS4 652 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 MIB1Q86YT6 1006 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 EZH1Q92800 747 aaPredicted RBP18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 LSM14BQ9BX40 385 aaKnown RBP18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 UBXN6Q9BZV1 441 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 KIAA1257Q9ULG3 409 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 FHOD1Q9Y613 1164 aa18.45■□□□□ 0.54
RHBDD3-207ENST00000496342 FAM170AA1A519 330 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 THAP12O43422 761 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 GREM1O60565 184 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 EEF1GP26641 437 aaKnown RBP18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 GNA15P30679 374 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 OPRD1P41143 372 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 GALK1P51570 392 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 MESP2Q0VG99 397 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 CCINQ13939 588 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 NCAPHQ15003 741 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 DHCR24Q15392 516 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 TMEM196Q5HYL7 178 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 DDX42Q86XP3 938 aaKnown RBP eCLIP18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 SIX6OS1Q8N1H7 587 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 AOPEPQ8N6M6 819 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 SLC35F5Q8WV83 523 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 SHC3Q92529 594 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 EDEM1Q92611 657 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 HSD3B7Q9H2F3 369 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 POLR3BQ9NW08 1133 aaPredicted RBP18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 CYTH4Q9UIA0 394 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 R4GN57 208 aa18.44■□□□□ 0.54
RHBDD3-207ENST00000496342 E2F8A0AVK6 867 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 YJEFN3A6XGL0 299 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 E7ENQ6 273 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 TRDMT1O14717 391 aaKnown RBP18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 LAMTOR5O43504 91 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 SP9P0CG40 484 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 RALAP11233 206 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 DAOAP59103 153 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 SATB1Q01826 763 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 MYL5Q02045 173 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 ANO6Q4KMQ2 910 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 LY6G5CQ5SRR4 150 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 PM20D1Q6GTS8 502 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 RHBDF2Q6PJF5 856 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 ENOSF1Q7L5Y1 443 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 SFTPA1Q8IWL2 248 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 ADGRG2Q8IZP9 1017 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 ZNF606Q8WXB4 792 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 KCTD13Q8WZ19 329 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 P2RY13Q9BPV8 354 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 MIS12Q9H081 205 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 TJP2Q9UDY2 1190 aa18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 MYO18AQ92614 2054 aaKnown RBP18.43■□□□□ 0.54
RHBDD3-207ENST00000496342 FOXN3O00409 490 aaPredicted RBP18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 STC2O76061 302 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 GPD2P43304 727 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 MAGEA9P43362 315 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 SLC6A11P48066 632 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 PSEN1P49768 467 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 CSTF1Q05048 431 aaKnown RBP18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 RAPGEF1Q13905 1077 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 LRRC32Q14392 662 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 STILQ15468 1287 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 C1orf228Q6PIY5 440 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 RSRC2Q7L4I2 434 aaKnown RBP18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 PASD1Q8IV76 773 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 CD101Q93033 1021 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 ST7Q9NRC1 585 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 CLIC5Q9NZA1 410 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 SFMBT1Q9UHJ3 866 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 DNMT3LQ9UJW3 386 aa18.42■□□□□ 0.54
RHBDD3-207ENST00000496342 SLC9A3R1O14745 358 aaPredicted RBP18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 EPHB6O15197 1021 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 COPB1P53618 953 aaKnown RBP18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 KDSRQ06136 332 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 DGKKQ5KSL6 1271 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 KLHDC7AQ5VTJ3 777 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 BTBD8Q5XKL5 378 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 KLHDC10Q6PID8 442 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 ALYREFQ86V81 257 aaKnown RBP18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 NAT16Q8N8M0 369 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 P2RY11Q96G91 374 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 PLCB1Q9NQ66 1216 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 PRMT8Q9NR22 394 aaPredicted RBP18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 MARCH2Q9P0N8 246 aa18.41■□□□□ 0.54
RHBDD3-207ENST00000496342 SLC12A8A0AV02 714 aa18.4■□□□□ 0.54
RHBDD3-207ENST00000496342 MSI1O43347 362 aaKnown RBP18.4■□□□□ 0.54
RHBDD3-207ENST00000496342 RNF40O75150 1001 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms