RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CNGB3Q9NQW8 809 aa17.2■□□□□ 0.34
SF3A1-209ENST00000496189 ST7Q9NRC1 585 aa17.2■□□□□ 0.34
SF3A1-209ENST00000496189 OLA1Q9NTK5 396 aaKnown RBP17.2■□□□□ 0.34
SF3A1-209ENST00000496189 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.2■□□□□ 0.34
SF3A1-209ENST00000496189 CEP83Q9Y592 693 aa17.2■□□□□ 0.34
SF3A1-209ENST00000496189 SART1O43290 800 aaKnown RBP17.19■□□□□ 0.34
SF3A1-209ENST00000496189 FBXO21O94952 628 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 IRF1P10914 325 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 LCP1P13796 627 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 TARSP26639 723 aaKnown RBP17.19■□□□□ 0.34
SF3A1-209ENST00000496189 KRT9P35527 623 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 ACADSBP45954 432 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 RPS9P46781 194 aaKnown RBP17.19■□□□□ 0.34
SF3A1-209ENST00000496189 SOX9P48436 509 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 COG7P83436 770 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 GRSF1Q12849 480 aaKnown RBP eCLIP17.19■□□□□ 0.34
SF3A1-209ENST00000496189 PPP2R5DQ14738 602 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 DGKKQ5KSL6 1271 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 KLHDC7AQ5VTJ3 777 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 ZNF276Q8N554 614 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 NOX5Q96PH1 765 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 IER2Q9BTL4 223 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 PDCL3Q9H2J4 239 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 HPS4Q9NQG7 708 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 ZDBF2Q9HCK1 2354 aa17.19■□□□□ 0.34
SF3A1-209ENST00000496189 MIA3Q5JRA6 1907 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 ADH1CP00326 375 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 ARSAP15289 507 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 RGS7P49802 495 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 PON2Q15165 354 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 SYCP1Q15431 976 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 EML3Q32P44 896 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 PM20D1Q6GTS8 502 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 APTXQ7Z2E3 356 aaKnown RBP17.18■□□□□ 0.34
SF3A1-209ENST00000496189 MIB1Q86YT6 1006 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 SCML4Q8N228 414 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 NEK11Q8NG66 645 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 CCDC26Q8TAB7 109 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 SLC35F5Q8WV83 523 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 ZNF606Q8WXB4 792 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 FAM122AQ96E09 287 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 ERGIC2Q96RQ1 377 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 TRIM62Q9BVG3 475 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 NMUR1Q9HB89 426 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 SIX2Q9NPC8 291 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
SF3A1-209ENST00000496189 ABCC13Q9NSE7 274 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 SPATA6Q9NWH7 488 aaPredicted RBP17.18■□□□□ 0.34
SF3A1-209ENST00000496189 RAPGEFL1Q9UHV5 662 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 RASAL2Q9UJF2 1139 aa17.18■□□□□ 0.34
SF3A1-209ENST00000496189 MTF2Q9Y483 593 aaPredicted RBP17.18■□□□□ 0.34
SF3A1-209ENST00000496189 TULP2O00295 520 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 LAMTOR5O43504 91 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 TBX18O95935 607 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 TPM3P06753 285 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 COL4A2P08572 1712 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 UCHL3P15374 230 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 APBA1Q02410 837 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 EFEMP1Q12805 493 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 PKDCCQ504Y2 493 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 PMF1Q6P1K2 205 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 RIN3Q8TB24 985 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 IRGQQ8WZA9 623 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 CLDN23Q96B33 292 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 P2RY13Q9BPV8 354 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 DCLK3Q9C098 648 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 LMAN1LQ9HAT1 526 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 FAM207AQ9NSI2 230 aaPredicted RBP17.17■□□□□ 0.34
SF3A1-209ENST00000496189 KIF26AQ9ULI4 1882 aaPredicted RBP17.17■□□□□ 0.34
SF3A1-209ENST00000496189 ZNF510Q9Y2H8 683 aa17.17■□□□□ 0.34
SF3A1-209ENST00000496189 ZNF318Q5VUA4 2279 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 A0A1B0GTH6 734 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 GJA4P35212 333 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 UBASH3AP57075 661 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 FANCCQ00597 558 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 DRAP1Q14919 205 aaPredicted RBP17.16■□□□□ 0.34
SF3A1-209ENST00000496189 ANGPT1Q15389 498 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 PREPLQ4J6C6 727 aaPredicted RBP17.16■□□□□ 0.34
SF3A1-209ENST00000496189 SCD5Q86SK9 330 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 C1orf210Q8IVY1 113 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 SYNPOQ8N3V7 929 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 PRSS33Q8NF86 280 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 STK32AQ8WU08 396 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 ATOH1Q92858 354 aaPredicted RBP17.16■□□□□ 0.34
SF3A1-209ENST00000496189 SPAG5Q96R06 1193 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 KLF16Q9BXK1 252 aaPredicted RBP17.16■□□□□ 0.34
SF3A1-209ENST00000496189 STK33Q9BYT3 514 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 LINC00597Q9H2U6 94 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 OSER1Q9NX31 292 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 MARCH2Q9P0N8 246 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 NUDT5Q9UKK9 219 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 SIK3Q9Y2K2 1263 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 FHOD1Q9Y613 1164 aa17.16■□□□□ 0.34
SF3A1-209ENST00000496189 FOXN3O00409 490 aaPredicted RBP17.15■□□□□ 0.34
SF3A1-209ENST00000496189 CALCAP01258 141 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 DRD1P21728 446 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 GPD2P43304 727 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 DAOAP59103 153 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 ZXDBP98169 803 aa17.15■□□□□ 0.34
SF3A1-209ENST00000496189 GAD2Q05329 585 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms