RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 CYB5D1Q6P9G0 228 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 CDKL3Q8IVW4 592 aaPredicted RBP11.52□□□□□ -0.57
CMSS1-208ENST00000496116 PQLC3Q8N755 202 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 APPL2Q8NEU8 664 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 PCDH19Q8TAB3 1148 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 KHSRPQ92945 711 aaKnown RBP eCLIP11.52□□□□□ -0.572e-6■■■■□ 21
CMSS1-208ENST00000496116 WDR83Q9BRX9 315 aaKnown RBP11.52□□□□□ -0.57
CMSS1-208ENST00000496116 APOL6Q9BWW8 343 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 B3GNT5Q9BYG0 378 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 DPEP3Q9H4B8 488 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 USP29Q9HBJ7 922 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 GPATCH2LQ9NWQ4 482 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 GDAP2Q9NXN4 497 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 NME7Q9Y5B8 376 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 ZNF236Q9UL36 1845 aa11.52□□□□□ -0.57
CMSS1-208ENST00000496116 SMIM28A0A1B0GU29 152 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 TM9SF1O15321 606 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 UBOX5O94941 541 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 CYP2F1P24903 491 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 RBL1P28749 1068 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 ADORA2BP29275 332 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 NR2C2P49116 596 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 TAF6P49848 677 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 MNAT1P51948 309 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 NRLP54845 237 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 CBLBQ13191 982 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 DNAJC3Q13217 504 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 DPYSL2Q16555 572 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 SV2CQ496J9 727 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 LVRNQ6Q4G3 990 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 FAM47EQ6ZV65 393 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 TLK2Q86UE8 772 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 DCAKDQ8WVC6 231 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 DNAJB3Q8WWF6 145 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 TNIP3Q96KP6 325 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 HSFY1Q96LI6 401 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 PHTF1Q9UMS5 762 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 GNEQ9Y223 722 aaKnown RBP11.51□□□□□ -0.57
CMSS1-208ENST00000496116 TEX264Q9Y6I9 313 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 KBTBD13C9JR72 458 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 INHBAP08476 426 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 PDGFRBP09619 1106 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 LCP1P13796 627 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 CCDC130P13994 396 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 KCNE1P15382 129 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 RPL34P49207 117 aaKnown RBP11.51□□□□□ -0.57
CMSS1-208ENST00000496116 CPT1AP50416 773 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 SLC8A3P57103 927 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 YWHAGP61981 247 aaKnown RBP eCLIP11.51□□□□□ -0.57
CMSS1-208ENST00000496116 ZNF200P98182 395 aaPredicted RBP11.51□□□□□ -0.57
CMSS1-208ENST00000496116 CCDC15Q0P6D6 951 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 MTM1Q13496 603 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 SNX17Q15036 470 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 GALNTL6Q49A17 601 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 SPRYD7Q5W111 196 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 CGB2Q6NT52 195 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 PARP9Q8IXQ6 854 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 C2orf69Q8N8R5 385 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 KBTBD7Q8WVZ9 684 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 CENPIQ92674 756 aaPredicted RBP11.51□□□□□ -0.57
CMSS1-208ENST00000496116 NRDE2Q9H7Z3 1164 aa11.51□□□□□ -0.57
CMSS1-208ENST00000496116 TCRBV9S1A1TA0A576 114 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 HUS1O60921 280 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 BNIP1Q12981 228 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 PTK7Q13308 1070 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 SETDB1Q15047 1291 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 SLC1A5Q15758 541 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 SNCBQ16143 134 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 CA9Q16790 459 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 XKR4Q5GH76 650 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 EFHC1Q5JVL4 640 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 ICE2Q659A1 982 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 MZB1Q8WU39 189 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 LRRC39Q96DD0 335 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 C11orf84Q9BUA3 381 aaPredicted RBP11.5□□□□□ -0.57
CMSS1-208ENST00000496116 ADAM33Q9BZ11 813 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 DHX35Q9H5Z1 703 aaKnown RBP11.5□□□□□ -0.57
CMSS1-208ENST00000496116 PNPLA8Q9NP80 782 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 ETNK2Q9NVF9 386 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 GGT7Q9UJ14 662 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 AP4E1Q9UPM8 1137 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 EDF1O60869 148 aaKnown RBP11.5□□□□□ -0.57
CMSS1-208ENST00000496116 GABBR2O75899 941 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 MT-ND3P03897 115 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 APRTP07741 180 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 ALDH3A1P30838 453 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 L1CAMP32004 1257 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 MAGEA6P43360 314 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 PSEN2P49810 448 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 ADAM17P78536 824 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 MAP2K5Q13163 448 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 PRAMEF19Q5SWL8 479 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 BZW1Q7L1Q6 419 aaKnown RBP11.5□□□□□ -0.57
CMSS1-208ENST00000496116 STRADAQ7RTN6 431 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 ADGRF2Q8IZF7 708 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 VPS52Q8N1B4 723 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 FITM2Q8N6M3 262 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 SLC2A14Q8TDB8 520 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 TCP10LQ8TDR4 215 aa11.5□□□□□ -0.57
CMSS1-208ENST00000496116 CLEC4CQ8WTT0 213 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms