RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 CA9Q16790 459 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 PM20D1Q6GTS8 502 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 FUT10Q6P4F1 479 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 TMEM173Q86WV6 379 aaPredicted RBP17.09■□□□□ 0.33
HLA-A-208ENST00000496081 DCP1BQ8IZD4 617 aaKnown RBP17.09■□□□□ 0.33
HLA-A-208ENST00000496081 TNS4Q8IZW8 715 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 HAUS1Q96CS2 278 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 B3GALT6Q96L58 329 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 CCDC114Q96M63 670 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 VIPAS39Q9H9C1 493 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 GRHL1Q9NZI5 618 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 DNPEPQ9ULA0 475 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 NAALADL1Q9UQQ1 740 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 PATJQ8NI35 1801 aa17.09■□□□□ 0.33
HLA-A-208ENST00000496081 SF3B1O75533 1304 aaKnown RBP eCLIP17.09■□□□□ 0.33
HLA-A-208ENST00000496081 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 DGKIO75912 1065 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 LTFP02788 710 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 IL4RP24394 825 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 CTXN3Q4LDR2 81 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 ERMARDQ5T6L9 678 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 SYDE1Q6ZW31 735 aaPredicted RBP17.08■□□□□ 0.33
HLA-A-208ENST00000496081 RFX6Q8HWS3 928 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 MAP7D3Q8IWC1 876 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 BCL7CQ8WUZ0 217 aaPredicted RBP17.08■□□□□ 0.33
HLA-A-208ENST00000496081 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.33
HLA-A-208ENST00000496081 PCDH18Q9HCL0 1135 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 ZDHHC18Q9NUE0 388 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 OGFRQ9NZT2 677 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 SAE1Q9UBE0 346 aaPredicted RBP17.08■□□□□ 0.33
HLA-A-208ENST00000496081 HPCAL4Q9UM19 191 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 USP3Q9Y6I4 520 aa17.08■□□□□ 0.33
HLA-A-208ENST00000496081 GAS8O95995 478 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 TIMP1P01033 207 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 EN2P19622 333 aaPredicted RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 GRIK1P39086 918 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 PTK6Q13882 451 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 BYSLQ13895 437 aaKnown RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 KRT81Q14533 505 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 SCML4Q8N228 414 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 CCDC185Q8N715 623 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 TSEN2Q8NCE0 465 aaKnown RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 FAM71BQ8TC56 605 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 IRGQQ8WZA9 623 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 STAP1Q9ULZ2 295 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 NEU2Q9Y3R4 380 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 LTBP2Q14767 1821 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 COL4A6Q14031 1691 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 CCDC85CA6NKD9 419 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 M0QYT0 321 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 TNFRSF10BO14763 440 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 CAPN9O14815 690 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 ELAVL2Q12926 359 aaKnown RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 NFE2Q16621 373 aaPredicted RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 ZDHHC24Q6UX98 284 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 NECAB2Q7Z6G3 386 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 TTC13Q8NBP0 860 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 SLC35B2Q8TB61 432 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 ACTL9Q8TC94 416 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 NKD2Q969F2 451 aaPredicted RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 FUBP3Q96I24 572 aaKnown RBP eCLIP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 RNF157Q96PX1 679 aa17.07■□□□□ 0.32
HLA-A-208ENST00000496081 PRDM5Q9NQX1 630 aaPredicted RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 ABI2Q9NYB9 513 aaPredicted RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 DRG1Q9Y295 367 aaKnown RBP17.07■□□□□ 0.32
HLA-A-208ENST00000496081 ABHD14A-ACY1A0A1B0GW23 586 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 OR6C75A6NL08 312 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 APOC4-APOC2K7ER74 178 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 KIAA0355O15063 1070 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 APOC2P02655 101 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 NCAM1P13591 858 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 CSF2RAP15509 400 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 L1CAMP32004 1257 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 GBP1P32455 592 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 PLTPP55058 493 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 VCPP55072 806 aaKnown RBP17.06■□□□□ 0.32
HLA-A-208ENST00000496081 OTUD4Q01804 1114 aaKnown RBP17.06■□□□□ 0.32
HLA-A-208ENST00000496081 LMNB2Q03252 620 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
HLA-A-208ENST00000496081 DPYSL2Q16555 572 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 RTP2Q5QGT7 225 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 TAS1R1Q7RTX1 841 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 FAM131BQ86XD5 332 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 VSIG1Q86XK7 387 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 MREGQ8N565 214 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 TOP1MTQ969P6 601 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 MAK16Q9BXY0 300 aaKnown RBP17.06■□□□□ 0.32
HLA-A-208ENST00000496081 MAGEB5Q9BZ81 275 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 CWH43Q9H720 699 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 MTMR10Q9NXD2 777 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 AP4E1Q9UPM8 1137 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 ZNF148Q9UQR1 794 aa17.06■□□□□ 0.32
HLA-A-208ENST00000496081 COL4A4P53420 1690 aaPredicted RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 IVDP26440 423 aa17.05■□□□□ 0.32
HLA-A-208ENST00000496081 RDXP35241 583 aaKnown RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 ALDH7A1P49419 539 aaKnown RBP17.05■□□□□ 0.32
HLA-A-208ENST00000496081 SLC5A3P53794 718 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms