RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 P3H1Q32P28 736 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 UBXN11Q5T124 520 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 GDF6Q6KF10 455 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 DARS2Q6PI48 645 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 OLFML1Q6UWY5 402 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 TRIM67Q6ZTA4 783 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PDZD4Q76G19 769 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 STRADAQ7RTN6 431 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 TMEM110Q86TL2 294 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SERINC5Q86VE9 423 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PSTKQ8IV42 348 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 PPIL6Q8IXY8 311 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 THEM5Q8N1Q8 247 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 ZCCHC9Q8N567 271 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 URGCPQ8TCY9 931 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 FAM172AQ8WUF8 416 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 TMEM40Q8WWA1 233 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PIK3R5Q8WYR1 880 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 C18orf25Q96B23 403 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 FAM149B1Q96BN6 582 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PGM2Q96G03 612 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 GLT1D1Q96MS3 346 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SERPINB12Q96P63 405 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PPP1R10Q96QC0 940 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 SELENOSQ9BQE4 189 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SYT15Q9BQS2 421 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 TMEM109Q9BVC6 243 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 TXLNGYQ9BZA5 131 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SLC6A16Q9GZN6 736 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 SENP6Q9GZR1 1112 aaPredicted RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 NSRP1Q9H0G5 558 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 RRN3Q9NYV6 651 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.22□□□□□ -1.25
USP39-219ENST00000496047 PAK5Q9P286 719 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 PCSK1NQ9UHG2 260 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 CYTH4Q9UIA0 394 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 DNPEPQ9ULA0 475 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 CDH9Q9ULB4 789 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 ST3GAL5Q9UNP4 418 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 NOVA2Q9UNW9 492 aaKnown RBP7.22□□□□□ -1.25
USP39-219ENST00000496047 NUP205Q92621 2012 aa7.22□□□□□ -1.25
USP39-219ENST00000496047 VWA8A3KMH1 1905 aa7.21□□□□□ -1.25
USP39-219ENST00000496047 TLDC2A0PJX2 215 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 KBTBD13C9JR72 458 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 H3BRJ5 948 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 CAPN9O14815 690 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 MEFVO15553 781 aaPredicted RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 ADAMTS4O75173 837 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 CDH16O75309 829 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 DXOO77932 396 aaKnown RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 TTC4O95801 387 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 ZBED1O96006 694 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 IGHA2P01877 340 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 PDGFRBP09619 1106 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 RBP3P10745 1247 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 LCP1P13796 627 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 CCDC130P13994 396 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 NPR3P17342 541 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 MAP2K2P36507 400 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 FLT3P36888 993 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 SULT1E1P49888 294 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 ATP1A2P50993 1020 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 ZNF135P52742 658 aaPredicted RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 GYS2P54840 703 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 AIF1P55008 147 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 BCAR1P56945 870 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 LILRA4P59901 499 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 ATP11AP98196 1134 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 TSPY1Q01534 308 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 CACNB2Q08289 660 aaPredicted RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 SLC29A2Q14542 456 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 NOMO1Q15155 1222 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 LLGL1Q15334 1064 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 TRADDQ15628 312 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 TRIP13Q15645 432 aaPredicted RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 KCNA10Q16322 511 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 ARL13BQ3SXY8 428 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 DNAJC21Q5F1R6 531 aaKnown RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 ERMARDQ5T6L9 678 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 DAB2IPQ5VWQ8 1189 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 HIBCHQ6NVY1 386 aaPredicted RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 B4GALNT4Q76KP1 1039 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 TTC30AQ86WT1 665 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 RELL1Q8IUW5 271 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 C12orf29Q8N999 325 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 SMG8Q8ND04 991 aaKnown RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 CMASQ8NFW8 434 aaPredicted RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 ACTL9Q8TC94 416 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 SLC35F5Q8WV83 523 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 DYDC1Q8WWB3 177 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 RAPGEF5Q92565 580 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 ARL8AQ96BM9 186 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 SMARCD1Q96GM5 515 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 SENP8Q96LD8 212 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 HNRNPABQ99729 332 aaKnown RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 TSEN34Q9BSV6 310 aaKnown RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 DUSP16Q9BY84 665 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 KLC2Q9H0B6 622 aa7.21□□□□□ -1.26
USP39-219ENST00000496047 HMX1Q9NP08 348 aaPredicted RBP7.21□□□□□ -1.26
USP39-219ENST00000496047 DDX43Q9NXZ2 648 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms