RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TCRBV21S2A2A0A5A6 115 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 MAP3K13O43283 966 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 KRT37O76014 449 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 ADORA2BP29275 332 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 PSAPL1Q6NUJ1 521 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 ZNF513Q8N8E2 541 aaPredicted RBP24.54■■□□□ 1.52
COL27A1-208ENST00000494780 TERB1Q8NA31 727 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 CCDC47Q96A33 483 aaKnown RBP24.54■■□□□ 1.52
COL27A1-208ENST00000494780 IMPG2Q9BZV3 1241 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 CYP3A43Q9HB55 503 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 ZDHHC4Q9NPG8 344 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 TMEM9BQ9NQ34 198 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 EVLQ9UI08 416 aaPredicted RBP24.54■■□□□ 1.52
COL27A1-208ENST00000494780 CIZ1Q9ULV3 898 aaPredicted RBP24.54■■□□□ 1.52
COL27A1-208ENST00000494780 SCML2Q9UQR0 700 aa24.54■■□□□ 1.52
COL27A1-208ENST00000494780 GREM1O60565 184 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 TBX18O95935 607 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 ATP5C1P36542 298 aaKnown RBP24.53■■□□□ 1.52
COL27A1-208ENST00000494780 GOLGA8FQ08AF8 430 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 GOLGA8DPQ0D2H9 430 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 NFIL3Q16649 462 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 MAP7D1Q3KQU3 841 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 SPDYCQ5MJ68 293 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 C10orf76Q5T2E6 689 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 CLEC20AQ6ZU45 233 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 INTS8Q75QN2 995 aaKnown RBP24.53■■□□□ 1.52
COL27A1-208ENST00000494780 PGBD3Q8N328 593 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 SPRYD3Q8NCJ5 442 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 PIGKQ92643 395 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 NT5C1AQ9BXI3 368 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 PNPLA8Q9NP80 782 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 STARD13Q9Y3M8 1113 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 PCDHA5Q9Y5H7 936 aa24.53■■□□□ 1.52
COL27A1-208ENST00000494780 PATE3B3GLJ2 98 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 HHLA1C9JL84 531 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 RHOBTB3O94955 611 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 DPP6P42658 865 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 SYKP43405 635 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 NOVA1P51513 510 aaKnown RBP24.52■■□□□ 1.52
COL27A1-208ENST00000494780 ENPEPQ07075 957 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 GRAMD4Q6IC98 578 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 GPRIN1Q7Z2K8 1008 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 CYFIP2Q96F07 1278 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 SPATA32Q96LK8 384 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 TWNKQ96RR1 684 aa24.52■■□□□ 1.52
COL27A1-208ENST00000494780 MBD1Q9UIS9 605 aaPredicted RBP24.52■■□□□ 1.52
COL27A1-208ENST00000494780 LSM7Q9UK45 103 aaKnown RBP24.52■■□□□ 1.52
COL27A1-208ENST00000494780 MYH10P35580 1976 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 NR2F2P24468 414 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 GCLMP48507 274 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 KRT85P78386 507 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 IRX4P78413 519 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 KLHDC10Q6PID8 442 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 SYT12Q8IV01 421 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 FRMD1Q8N878 549 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 XPO6Q96QU8 1125 aaKnown RBP24.51■■□□□ 1.51
COL27A1-208ENST00000494780 DNAI2Q9GZS0 605 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 NIF3L1Q9GZT8 377 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 APOBEC3GQ9HC16 384 aaKnown RBP24.51■■□□□ 1.51
COL27A1-208ENST00000494780 DNAJC17Q9NVM6 304 aaKnown RBP24.51■■□□□ 1.51
COL27A1-208ENST00000494780 OSER1Q9NX31 292 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 MARK1Q9P0L2 795 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 WDR35Q9P2L0 1181 aa24.51■■□□□ 1.51
COL27A1-208ENST00000494780 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 FAM237AA0A1B0GTK4 181 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 NEDD8-MDP1E9PL57 170 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 CDX4O14627 284 aaPredicted RBP24.5■■□□□ 1.51
COL27A1-208ENST00000494780 CYP26A1O43174 497 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 CACNG3O60359 315 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 KRT13P13646 458 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 ACO1P21399 889 aaKnown RBP24.5■■□□□ 1.51
COL27A1-208ENST00000494780 NTSR1P30989 418 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 LMAN2Q12907 356 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 TMEFF1Q8IYR6 380 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 TAS1R2Q8TE23 839 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 JAKMIP2Q96AA8 810 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 BBS2Q9BXC9 721 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 NMUR1Q9HB89 426 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.5■■□□□ 1.51
COL27A1-208ENST00000494780 HCN2Q9UL51 889 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 PLXND1Q9Y4D7 1925 aa24.5■■□□□ 1.51
COL27A1-208ENST00000494780 MYO18AQ92614 2054 aaKnown RBP24.49■■□□□ 1.51
COL27A1-208ENST00000494780 TRIM24O15164 1050 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 CILPO75339 1184 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 PRR29P0C7W0 189 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 TRIM49P0CI25 452 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 TRIM49CP0CI26 452 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 RARGP13631 454 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 HOXB2P14652 356 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 RPL13P26373 211 aaKnown RBP24.49■■□□□ 1.51
COL27A1-208ENST00000494780 PTGER3P43115 390 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 PLA2G4AP47712 749 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 NDUFA8P51970 172 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 PPP3CAQ08209 521 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 DPYDQ12882 1025 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 TRIM61Q5EBN2 209 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 LYSMD4Q5XG99 296 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 ARMCX6Q7L4S7 300 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 FAM186BQ8IYM0 893 aa24.49■■□□□ 1.51
COL27A1-208ENST00000494780 CCDC150Q8NCX0 1101 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms