RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 CYTH2Q99418 400 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PLIN2Q99541 437 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 NPLQ9BXD5 320 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 INTS2Q9H0H0 1204 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SP140LQ9H930 580 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A7Q9HAW7 530 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A10Q9HAW8 530 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 UGT1A8Q9HAW9 530 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PCDH9Q9HC56 1237 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CPNE5Q9HCH3 593 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PLLPQ9Y342 182 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 MAGEB6P1A0A0J9YX57 407 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 FAM237BA0A1B0GVD1 139 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CCDC160A6NGH7 325 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CFAP99D6REC4 459 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 MSI1O43347 362 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 LIASO43766 372 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SPOPO43791 374 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 BCAS2O75934 225 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ALX3O95076 343 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 FTLP02792 175 aaPredicted RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ERBB2P04626 1255 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 FDX1P10109 184 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 DLATP10515 647 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 BMP1P13497 986 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 GAP43P17677 238 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PSMC2P35998 433 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 HK2P52789 917 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 THOP1P52888 689 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 OVGP1Q12889 678 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SELENBP1Q13228 472 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CYP4A22Q5TCH4 519 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ANGEL2Q5VTE6 544 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 EGFLAMQ63HQ2 1017 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PLA2G4FQ68DD2 849 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ADAT2Q7Z6V5 191 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SLC51BQ86UW2 128 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CADM3Q8N126 398 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 GOLM1Q8NBJ4 401 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SLC26A7Q8TE54 656 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 TAMM41Q96BW9 452 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 TRIM11Q96F44 468 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 C9orf72Q96LT7 481 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 PAFAH2Q99487 392 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 CLSTN3Q9BQT9 956 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 WDR12Q9GZL7 423 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SAYSD1Q9NPB0 183 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 AKIP1Q9NQ31 210 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 FKBP14Q9NWM8 211 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 XPO7Q9UIA9 1087 aaKnown RBP4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ITM2BQ9Y287 266 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 SCINQ9Y6U3 715 aa4.97□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF195O14628 629 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 ATP2A1O14983 1001 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 CLDN3O15551 220 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 ABCB1P08183 1280 aaPredicted RBP4.96□□□□□ -1.61
PRKD3-210ENST00000494667 PEX3P56589 373 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 ESRRGP62508 458 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 PDIA2Q13087 525 aaKnown RBP4.96□□□□□ -1.61
PRKD3-210ENST00000494667 ATP1A4Q13733 1029 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 PTK2BQ14289 1009 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 ZNF846Q147U1 533 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 NKX1-1Q15270 411 aaPredicted RBP4.96□□□□□ -1.61
PRKD3-210ENST00000494667 TRIP13Q15645 432 aaPredicted RBP4.96□□□□□ -1.61
PRKD3-210ENST00000494667 OASLQ15646 514 aaKnown RBP4.96□□□□□ -1.61
PRKD3-210ENST00000494667 CAVIN4Q5BKX8 364 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 PIGGQ5H8A4 983 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 PPP2R2DQ66LE6 453 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 DYMQ7RTS9 669 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 MIER3Q7Z3K6 550 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 ANKFN1Q8N957 763 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 CALML6Q8TD86 181 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 RASGRP4Q8TDF6 673 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 DHX38Q92620 1227 aaKnown RBP4.96□□□□□ -1.61
PRKD3-210ENST00000494667 LRRC59Q96AG4 307 aaKnown RBP4.96□□□□□ -1.61
PRKD3-210ENST00000494667 ACDQ96AP0 544 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 RMND5BQ96G75 393 aaPredicted RBP4.96□□□□□ -1.61
PRKD3-210ENST00000494667 STRA6Q9BX79 667 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 NYXQ9GZU5 481 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 SCUBE2Q9NQ36 999 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 THAP1Q9NVV9 213 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 TMOD2Q9NZR1 351 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 ARMCX1Q9P291 453 aa4.96□□□□□ -1.61
PRKD3-210ENST00000494667 LRRIQ4A6NIV6 560 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 I3L4J1 428 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 CYP26A1O43174 497 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 LPXNO60711 386 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ATE1O95260 518 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 APOEP02649 317 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PLA2G4BP0C869 781 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 GRIK1P39086 918 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 GALNT1Q10472 559 aaPredicted RBP4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PTK7Q13308 1070 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 EPC2Q52LR7 807 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 LRRC38Q5VT99 294 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PPP1R2P3Q6NXS1 205 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 PTF1AQ7RTS3 328 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 ADAMTSL2Q86TH1 951 aa4.96□□□□□ -1.62
PRKD3-210ENST00000494667 GRAMD2AQ8IUY3 354 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms