RNA–Protein interactions for RNA: ENST00000494571.1

ATG3-207, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 2,758 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-207ENST00000494571 RAB19A4D1S5 217 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ARHGEF35A5YM69 484 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 B4E1Z4 1266 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 I3L4J1 428 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 AGRPO00253 132 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 FOXN3O00409 490 aaPredicted RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 TOR1BO14657 336 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 KIAA0391O15091 583 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 POLR1CO15160 346 aaPredicted RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 PJA2O43164 708 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MTSS1O43312 755 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MSI1O43347 362 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 CCNT2O60583 730 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 RNGTTO60942 597 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 PIAS1O75925 651 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 RSL1D1O76021 490 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 TM7SF2O76062 418 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 DLGAP3O95886 979 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 CFBP00751 764 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 NPPAP01160 153 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MCF2P10911 925 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MYL2P10916 166 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 POU2F1P14859 743 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 PSMC3P17980 439 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 EIF2AK2P19525 551 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 ABCG1P45844 678 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 TNNI2P48788 182 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ST13P50502 369 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 AKR1D1P51857 326 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 NPEPPSP55786 919 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 PPP4CP60510 307 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 GALK2Q01415 458 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 TAGLNQ01995 201 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 GALNT1Q10472 559 aaPredicted RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 DBPQ10586 325 aaPredicted RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 NFIAQ12857 509 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 CSTF3Q12996 717 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 SNAPC2Q13487 334 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 CTTNQ14247 550 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 TRIM25Q14258 630 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 SLC1A5Q15758 541 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 INAVAQ3KP66 663 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ESCO1Q5FWF5 840 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 RALGPS1Q5JS13 557 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 FAM209BQ5JX69 171 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 SHEQ5VZ18 495 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 IQSEC1Q6DN90 963 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 RWDD4Q6NW29 188 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 DHRS4L2Q6PKH6 230 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MPRIPQ6WCQ1 1025 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 GPR180Q86V85 440 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 DCP2Q8IU60 420 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 ZC3H7AQ8IWR0 971 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 TTC5Q8N0Z6 440 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 AHI1Q8N157 1196 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MARVELD2Q8N4S9 558 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ADAMTS16Q8TE57 1224 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 SDCCAG3Q96C92 435 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 RILPQ96NA2 401 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ALPK1Q96QP1 1244 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 PIP5K1AQ99755 562 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 TMEM246Q9BRR3 403 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MCMBPQ9BTE3 642 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 CDADC1Q9BWV3 514 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MIR1-1HGQ9H1L0 117 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 CD209Q9NNX6 404 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 PRDM11Q9NQV5 511 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 STRN4Q9NRL3 753 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 IGSF5Q9NSI5 407 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 TOR4AQ9NXH8 423 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ZSWIM5Q9P217 1185 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ANKMY1Q9P2S6 941 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 UBA2Q9UBT2 640 aaPredicted RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 CNOT7Q9UIV1 285 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 SLC45A1Q9Y2W3 748 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ZNF609O15014 1411 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 QSER1Q2KHR3 1735 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ZFYVE9O95405 1425 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MST1RQ04912 1400 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 FAM237BA0A1B0GVD1 139 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 TRIM75PA6NK02 468 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 POTECB2RU33 542 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ERVH48-1M5A8F1 160 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 EYA2O00167 538 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 EXTL3O43909 919 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 HLA-DRAP01903 254 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 CALB1P05937 261 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 HSMCR30P0CW71 290 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 HSPD1P10809 573 aaKnown RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 FGFR1P11362 822 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ZNF23P17027 643 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 ITIH1P19827 911 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 FMO4P31512 558 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 MSX2P35548 267 aaPredicted RBP4.18□□□□□ -1.74
ATG3-207ENST00000494571 HPCAL1P37235 193 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 HTR2BP41595 481 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 NT5C2P49902 561 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 KCNQ4P56696 695 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 HSD17B7P56937 341 aa4.18□□□□□ -1.74
ATG3-207ENST00000494571 GSTO1P78417 241 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms