RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 NACA2Q9H009 215 aa24.6■■□□□ 1.53
CLIC3-203ENST00000494426 LHX5Q9H2C1 402 aa24.6■■□□□ 1.53
CLIC3-203ENST00000494426 DUS2Q9NX74 493 aaKnown RBP24.6■■□□□ 1.53
CLIC3-203ENST00000494426 RALAP11233 206 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 CLCN5P51795 746 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 MLLT6P55198 1093 aaPredicted RBP24.59■■□□□ 1.53
CLIC3-203ENST00000494426 FANCCQ00597 558 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 RUNX3Q13761 415 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 PDGFRLQ15198 375 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 EML3Q32P44 896 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 FILIP1LQ4L180 1135 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 C10orf120Q5SQS8 335 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 BSPRYQ5W0U4 402 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 ASTLQ6HA08 431 aaPredicted RBP24.59■■□□□ 1.53
CLIC3-203ENST00000494426 TMEM110Q86TL2 294 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 NOP9Q86U38 636 aaKnown RBP24.59■■□□□ 1.53
CLIC3-203ENST00000494426 DDX42Q86XP3 938 aaKnown RBP eCLIP24.59■■□□□ 1.53
CLIC3-203ENST00000494426 PASD1Q8IV76 773 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 SCUBE3Q8IX30 993 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 TMEM105Q8N8V8 129 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 FOXQ1Q9C009 403 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 ST7Q9NRC1 585 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 TJP2Q9UDY2 1190 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 MTF2Q9Y483 593 aaPredicted RBP24.59■■□□□ 1.53
CLIC3-203ENST00000494426 PIAS3Q9Y6X2 628 aa24.59■■□□□ 1.53
CLIC3-203ENST00000494426 KANSL1LA0AUZ9 987 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 SCAMP3O14828 347 aaKnown RBP24.58■■□□□ 1.53
CLIC3-203ENST00000494426 GREM1O60565 184 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 GFPT2O94808 682 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 SERPINC1P01008 464 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 AOC1P19801 751 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 AVPR2P30518 371 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 KRT9P35527 623 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 SOX5P35711 763 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 TPM4P67936 248 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 ITPRIPL2Q3MIP1 535 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 SUGP1Q8IWZ8 645 aaKnown RBP24.58■■□□□ 1.53
CLIC3-203ENST00000494426 KIAA1958Q8N8K9 716 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 IRGQQ8WZA9 623 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 MIS12Q9H081 205 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 TSPY26PQ9H489 355 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 DNMT3LQ9UJW3 386 aa24.58■■□□□ 1.53
CLIC3-203ENST00000494426 E2F8A0AVK6 867 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 E5RJQ4 531 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 GOLGA6L19H0YKK7 550 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 STK25O00506 426 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 GLULP15104 373 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 STAT1P42224 750 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 ACADSBP45954 432 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 IFNAR2P48551 515 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 KPNA1P52294 538 aaPredicted RBP24.57■■□□□ 1.52
CLIC3-203ENST00000494426 PDCLQ13371 301 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 BTBD8Q5XKL5 378 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 ZNF687Q8N1G0 1237 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 C1orf131Q8NDD1 294 aaKnown RBP24.57■■□□□ 1.52
CLIC3-203ENST00000494426 EPS8L1Q8TE68 723 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 EDEM1Q92611 657 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 CHFRQ96EP1 664 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 SPAG5Q96R06 1193 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 CPXM1Q96SM3 734 aa24.57■■□□□ 1.52
CLIC3-203ENST00000494426 NOCTQ9UK39 431 aaKnown RBP24.57■■□□□ 1.52
CLIC3-203ENST00000494426 A0A1W2PQC6 194 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 SPECC1L-ADORA2AF8WAN1 911 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 PAPSS1O43252 624 aaPredicted RBP24.56■■□□□ 1.52
CLIC3-203ENST00000494426 FBXO21O94952 628 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 IRF1P10914 325 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 EFEMP1Q12805 493 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 TAF3Q5VWG9 929 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 TXNDC11Q6PKC3 985 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 TADA2BQ86TJ2 420 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 ADGRG2Q8IZP9 1017 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 CDK5RAP1Q96SZ6 601 aaKnown RBP24.56■■□□□ 1.52
CLIC3-203ENST00000494426 C8orf33Q9H7E9 229 aaPredicted RBP24.56■■□□□ 1.52
CLIC3-203ENST00000494426 ECT2Q9H8V3 914 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 LTB4R2Q9NPC1 389 aa24.56■■□□□ 1.52
CLIC3-203ENST00000494426 FYNP06241 537 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 TARSP26639 723 aaKnown RBP24.55■■□□□ 1.52
CLIC3-203ENST00000494426 CTHP32929 405 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 CDH5P33151 784 aaPredicted RBP24.55■■□□□ 1.52
CLIC3-203ENST00000494426 FZD5Q13467 585 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 ZNF852Q6ZMS4 543 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 MIB1Q86YT6 1006 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 PJA1Q8NG27 643 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 SLC20A1Q8WUM9 679 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 FAM3CQ92520 227 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 ABCC13Q9NSE7 274 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 RASAL2Q9UJF2 1139 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 SH3BP1Q9Y3L3 701 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 MIA3Q5JRA6 1907 aa24.55■■□□□ 1.52
CLIC3-203ENST00000494426 MAN2B1O00754 1011 aa24.54■■□□□ 1.52
CLIC3-203ENST00000494426 LTFP02788 710 aa24.54■■□□□ 1.52
CLIC3-203ENST00000494426 MMEP08473 750 aa24.54■■□□□ 1.52
CLIC3-203ENST00000494426 CHRNB2P17787 502 aa24.54■■□□□ 1.52
CLIC3-203ENST00000494426 ZNF445P59923 1031 aa24.54■■□□□ 1.52
CLIC3-203ENST00000494426 HTR3DQ70Z44 454 aa24.54■■□□□ 1.52
CLIC3-203ENST00000494426 RSRC2Q7L4I2 434 aaKnown RBP24.54■■□□□ 1.52
CLIC3-203ENST00000494426 RALGPS2Q86X27 583 aaPredicted RBP24.54■■□□□ 1.52
CLIC3-203ENST00000494426 BBS7Q8IWZ6 715 aa24.54■■□□□ 1.52
CLIC3-203ENST00000494426 CCDC105Q8IYK2 499 aa24.54■■□□□ 1.52
CLIC3-203ENST00000494426 BAP1Q92560 729 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms