RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 NCEH1Q6PIU2 408 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 FAM111BQ6SJ93 734 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 ACAD11Q709F0 780 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 RUFY3Q7L099 469 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 ANKRD35Q8N283 1001 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 HDDC3Q8N4P3 179 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 GPR161Q8N6U8 529 aaKnown RBP7.22□□□□□ -1.25
SNX13-210ENST00000494402 SYT2Q8N9I0 419 aaPredicted RBP7.22□□□□□ -1.25
SNX13-210ENST00000494402 POC5Q8NA72 575 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 LINS1Q8NG48 757 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 POMGNT1Q8WZA1 660 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 SAAL1Q96ER3 474 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 FER1L6-AS2Q96M78 137 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 UHRF1Q96T88 793 aaPredicted RBP7.22□□□□□ -1.25
SNX13-210ENST00000494402 CRACR2AQ9BSW2 395 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 KRT23Q9C075 422 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 AP5M1Q9H0R1 490 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 TAOK3Q9H2K8 898 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 VPS37BQ9H9H4 285 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 NRIP3Q9NQ35 241 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 TMLHEQ9NVH6 421 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 UCKL1Q9NWZ5 548 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 ZNF70Q9UC06 446 aaPredicted RBP7.22□□□□□ -1.25
SNX13-210ENST00000494402 CNTN6Q9UQ52 1028 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 LIPT1Q9Y234 373 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 GDAQ9Y2T3 454 aa7.22□□□□□ -1.25
SNX13-210ENST00000494402 hCG_1809904A0A1W2PP81 198 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 A0A1W2PPE2 198 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 A0A1W2PR64 198 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 LRRD1A4D1F6 860 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 A4D1N5 150 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 BOLA2-SMG1P6H3BVE0 249 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 ZNF263O14978 683 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 MCF2LO15068 1137 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 BCAT2O15382 392 aaPredicted RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 SEPT4O43236 478 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 TNFSF14O43557 240 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 CUTAO60888 179 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 SMPD2O60906 423 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 PPP1R11O60927 126 aaPredicted RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 DEAF1O75398 565 aaPredicted RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 WISP1O95388 367 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 AMY1AP04745 511 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 CD1AP06126 327 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 TPOP07202 933 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 RARGP13631 454 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 FDPSP14324 419 aaKnown RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 TPH1P17752 444 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 CPT2P23786 658 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 PBLDP30039 288 aaPredicted RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 SLC11A2P49281 568 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 CTXN1P60606 82 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 NOMO3P69849 1222 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 PDCLQ13371 301 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 TDGQ13569 410 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 ARHGEF7Q14155 803 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 IRF3Q14653 427 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 HSP90AA5PQ58FG0 334 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 ZNF484Q5JVG2 852 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 MPP7Q5T2T1 576 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 OLFML2BQ68BL8 750 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 KLHL35Q6PF15 583 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 Q6ZVL8 140 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 UBE3BQ7Z3V4 1068 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 ADCK1Q86TW2 530 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 PEX5LQ8IYB4 626 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 PQLC1Q8N2U9 271 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 ZGPATQ8N5A5 531 aaKnown RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 CEP76Q8TAP6 659 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 CLEC4DQ8WXI8 215 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 GRAMD1AQ96CP6 724 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 RBM17Q96I25 401 aaKnown RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 MAP6Q96JE9 813 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 CNDP1Q96KN2 507 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 MED15Q96RN5 788 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 TTPALQ9BTX7 342 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 DUSP15Q9H1R2 295 aaPredicted RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 RXFP1Q9HBX9 757 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 IL1RAPL2Q9NP60 686 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.21□□□□□ -1.26
SNX13-210ENST00000494402 ZSCAN32Q9NX65 697 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 ERVK13-1Q9NX77 482 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 HOXC10Q9NYD6 342 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 KCMF1Q9P0J7 381 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 CGNQ9P2M7 1197 aaKnown RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 SLC25A10Q9UBX3 287 aaPredicted RBP7.21□□□□□ -1.26
SNX13-210ENST00000494402 BTBD3Q9Y2F9 522 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 RWDD3Q9Y3V2 267 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 TRPV2Q9Y5S1 764 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 FPGT-TNNI3KV9GXZ4 949 aa7.21□□□□□ -1.26
SNX13-210ENST00000494402 LOC102723971A0A1B0GUV8 181 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 OR2W5A6NFC9 320 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 URADA6NGE7 173 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 NFIBO00712 420 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 GPR32O75388 356 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 SEC14L2O76054 403 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 KIAA0754O94854 1291 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 ALADP13716 330 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 HOXC8P31273 242 aa7.2□□□□□ -1.26
SNX13-210ENST00000494402 MAP2K3P46734 347 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms