RNA–Protein interactions for RNA: ENST00000494016.1

CPSF7-213, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 2

Gene CPSF7, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-213ENST00000494016 ANKRD23Q86SG2 305 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 ZNF677Q86XU0 584 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 RHPN2Q8IUC4 686 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 IQCKQ8N0W5 287 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 ABRAQ8N0Z2 381 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 MREGQ8N565 214 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 EIF1ADQ8N9N8 165 aaKnown RBP6.38□□□□□ -1.39
CPSF7-213ENST00000494016 RNF149Q8NC42 400 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 FAM71BQ8TC56 605 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 CPA5Q8WXQ8 436 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 IFT81Q8WYA0 676 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 SEC14L1Q92503 715 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 CYFIP2Q96F07 1278 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 ZNF668Q96K58 619 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-213ENST00000494016 HEXIM2Q96MH2 286 aaKnown RBP6.38□□□□□ -1.39
CPSF7-213ENST00000494016 MIPEPQ99797 713 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 PTPN18Q99952 460 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 JPH2Q9BR39 696 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-213ENST00000494016 NUP85Q9BW27 656 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 DDX47Q9H0S4 455 aaKnown RBP6.38□□□□□ -1.39
CPSF7-213ENST00000494016 WNT8AQ9H1J5 351 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 C2orf40Q9H1Z8 148 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 CARD9Q9H257 536 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 MINDY3Q9H8M7 445 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 LRRC4CQ9HCJ2 640 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 PCDH12Q9NPG4 1184 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 ANKFY1Q9P2R3 1169 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 CNOT8Q9UFF9 292 aaKnown RBP6.38□□□□□ -1.39
CPSF7-213ENST00000494016 ADAM21Q9UKJ8 722 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 GTF3C4Q9UKN8 822 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 NFU1Q9UMS0 254 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-213ENST00000494016 NOC2LQ9Y3T9 749 aaKnown RBP6.38□□□□□ -1.39
CPSF7-213ENST00000494016 PCDHB4Q9Y5E5 795 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 PCDHB14Q9Y5E9 798 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 PCDHA3Q9Y5H8 950 aa6.38□□□□□ -1.39
CPSF7-213ENST00000494016 MROH7Q68CQ1 1323 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 CCL15-CCL14A0A0B4J2E2 113 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ESYT3A0FGR9 886 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 TMEM110-MUSTN1A8MSY1 372 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 MIF4GDA9UHW6 222 aaKnown RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 UPK3BL1B0FP48 263 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 UPK3BL2E5RIL1 263 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 IGF2BP3O00425 579 aaKnown RBP eCLIP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 B4GALT5O43286 388 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 B4GALT4O60513 344 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ASS1P00966 412 aaKnown RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 GH1P01241 217 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 FGGP02679 453 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 LGALS2P05162 132 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 HOXC6P09630 235 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 PYGMP11217 842 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 HARSP12081 509 aaKnown RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 DNAJA1P31689 397 aaKnown RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 CYP2C19P33261 490 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 GCLCP48506 637 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 MARCKSL1P49006 195 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 PDE6CP51160 858 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 GTF2A2P52657 109 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ZNF132P52740 706 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 YARSP54577 528 aaKnown RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 MYL6P60660 151 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 BIRC3Q13489 604 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 SIX1Q15475 284 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 SURF1Q15526 300 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 CCL15Q16663 113 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 FAM187BQ17R55 369 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 KCTD19Q17RG1 926 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 SGSM1Q2NKQ1 1148 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ATF7IP2Q5U623 682 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 LETMD1Q6P1Q0 360 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 MPZL3Q6UWV2 235 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 PHLDB2Q86SQ0 1253 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 DDX42Q86XP3 938 aaKnown RBP eCLIP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 DTX1Q86Y01 620 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 PHF13Q86YI8 300 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 WDR49Q8IV35 697 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ZBTB8OSQ8IWT0 167 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 WDTC1Q8N5D0 677 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 PRELID2Q8N945 189 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 FAM13CQ8NE31 585 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 CCDC26Q8TAB7 109 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ZNF564Q8TBZ8 553 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 AFG1LQ8WV93 481 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 RIN2Q8WYP3 895 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ZNF653Q96CK0 615 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 RNPC3Q96LT9 517 aaKnown RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 SH3GL2Q99962 352 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 DPH2Q9BQC3 489 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ZSWIM1Q9BR11 485 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 C16orf70Q9BSU1 422 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 TCHPQ9BT92 498 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 NFKBIZQ9BYH8 718 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 TRIM7Q9C029 511 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 NEUROG2Q9H2A3 272 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ACBD3Q9H3P7 528 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 SLITRK6Q9H5Y7 841 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 IFT122Q9HBG6 1241 aa6.37□□□□□ -1.39
CPSF7-213ENST00000494016 ERVK-5Q9HDB9 667 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms