RNA–Protein interactions for RNA: ENST00000493853.1

RBM39-238, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-238ENST00000493853 CYP2J2P51589 502 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 SNRPFP62306 86 aaKnown RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 TNNC1P63316 161 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 ARHGAP8P85298 464 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 CYP27A1Q02318 531 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 PDE4CQ08493 712 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 SIM2Q14190 667 aaPredicted RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 KCNB1Q14721 858 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 TRIP4Q15650 581 aaPredicted RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 SNRNP35Q16560 246 aaKnown RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 SOWAHAQ2M3V2 549 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 ATL3Q6DD88 541 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 LAIR1Q6GTX8 287 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 LONP2Q86WA8 852 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 WFDC8Q8IUA0 241 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 NELFCDQ8IXH7 590 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 CPA6Q8N4T0 437 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 XXYLT1Q8NBI6 393 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 OR5B17Q8NGF7 314 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 OR6B3Q8NGW1 331 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 ZNF507Q8TCN5 953 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 NELL1Q92832 810 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 USP13Q92995 863 aaPredicted RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 SNX21Q969T3 373 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 CCDC127Q96BQ5 260 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 RMDN1Q96DB5 314 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 FUBP3Q96I24 572 aaKnown RBP eCLIP8.05□□□□□ -1.12
RBM39-238ENST00000493853 FAM84AQ96KN4 292 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 C7orf25Q9BPX7 421 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 SYT15Q9BQS2 421 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 RBSNQ9H1K0 784 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 BLZF1Q9H2G9 400 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 EBF3Q9H4W6 596 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 EHD2Q9NZN4 543 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 CGNQ9P2M7 1197 aaKnown RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 SIX4Q9UIU6 781 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 CDH9Q9ULB4 789 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 SLC8A2Q9UPR5 921 aa8.05□□□□□ -1.12
RBM39-238ENST00000493853 FNDC3AQ9Y2H6 1198 aaKnown RBP8.05□□□□□ -1.12
RBM39-238ENST00000493853 NCANO14594 1321 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 PVALEFA0A1B0GWK0 134 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 CHURC1-FNTBB4DL54 471 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 C9orf172C9J069 976 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 GABRDO14764 452 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 EXOC3O60645 756 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 ATP2C2O75185 946 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 F13A1P00488 732 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 ABL1P00519 1130 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 HDCP19113 662 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 LMO2P25791 158 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 MAGEA11P43364 429 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 IFNAR2P48551 515 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 FNTBP49356 437 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 PSMC1P62191 440 aaKnown RBP8.04□□□□□ -1.12
RBM39-238ENST00000493853 LMNB2Q03252 620 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 FAM160A1Q05DH4 1040 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 PSMD2Q13200 908 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 BIRC3Q13489 604 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 ZNF268Q14587 947 aaPredicted RBP8.04□□□□□ -1.12
RBM39-238ENST00000493853 PDGFRLQ15198 375 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 RSPO4Q2I0M5 234 aaPredicted RBP8.04□□□□□ -1.12
RBM39-238ENST00000493853 WDR72Q3MJ13 1102 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 CFAP221Q4G0U5 840 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 TRIM68Q6AZZ1 485 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 TXNDC11Q6PKC3 985 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 SHC4Q6S5L8 630 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 VSTM1Q6UX27 236 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 DENND5BQ6ZUT9 1274 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 UNC13DQ70J99 1090 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.04□□□□□ -1.12
RBM39-238ENST00000493853 TMEM150AQ86TG1 271 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 OSTM1Q86WC4 334 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 HOMEZQ8IX15 550 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 STKLD1Q8NE28 680 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 GLIS3Q8NEA6 775 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 GOLGA5Q8TBA6 731 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 TTC9Q92623 222 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 PLD4Q96BZ4 506 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 TRMT2BQ96GJ1 504 aaKnown RBP8.04□□□□□ -1.12
RBM39-238ENST00000493853 MYRFLQ96LU7 910 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 CYP2S1Q96SQ9 504 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 FAM83CQ9BQN1 747 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 SLC39A2Q9NP94 309 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 AGPAT3Q9NRZ7 376 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 DUS2Q9NX74 493 aaKnown RBP8.04□□□□□ -1.12
RBM39-238ENST00000493853 TRPM5Q9NZQ8 1165 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 PCDHA7Q9UN72 937 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 CCL26Q9Y258 94 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 DOCK8Q8NF50 2099 aa8.04□□□□□ -1.12
RBM39-238ENST00000493853 UBE4BO95155 1302 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 A8MXQ7 604 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 TRDMT1O14717 391 aaKnown RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 TGFB1I1O43294 461 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 NOL4O94818 638 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 CST3P01034 146 aaPredicted RBP8.03□□□□□ -1.12
RBM39-238ENST00000493853 RETP07949 1114 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 FAM163BP0C2L3 166 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 ARSAP15289 507 aa8.03□□□□□ -1.12
RBM39-238ENST00000493853 TRIM21P19474 475 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms