RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 ARAP1Q96P48 1450 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 UBE2Q2LH0YL09 131 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 PPP6CO00743 305 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 KIF3BO15066 747 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 TMPRSS11DO60235 418 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 TUBB4AP04350 444 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 CHRM5P08912 532 aaPredicted RBP4.46□□□□□ -1.7
CD46-217ENST00000493796 PRR35P0CG20 571 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 NTSR1P30989 418 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 SSBP2P81877 361 aaPredicted RBP4.46□□□□□ -1.7
CD46-217ENST00000493796 ZNF543Q08ER8 600 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 CERKLQ49MI3 558 aaPredicted RBP4.46□□□□□ -1.7
CD46-217ENST00000493796 DENND2CQ68D51 928 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 USP49Q70CQ1 688 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 NEK8Q86SG6 692 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 METTL25Q8N6Q8 603 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 C8orf58Q8NAV2 365 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 FYTTD1Q96QD9 318 aaKnown RBP4.46□□□□□ -1.7
CD46-217ENST00000493796 HIST1H2AAQ96QV6 131 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 SELENOOQ9BVL4 669 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 MGAT4CQ9UBM8 478 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 NKX1-2Q9UD57 310 aaPredicted RBP4.46□□□□□ -1.7
CD46-217ENST00000493796 FAM50BQ9Y247 325 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 HPSEQ9Y251 543 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 ZNF804BA4D1E1 1349 aa4.46□□□□□ -1.7
CD46-217ENST00000493796 ARHGAP35Q9NRY4 1499 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 A8MVJ9 347 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 BTBD19C9JJ37 291 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 KPNA5O15131 536 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 THAP12O43422 761 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 USP1O94782 785 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 MT-CO3P00414 261 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 CYP2A6P11509 494 aaPredicted RBP4.45□□□□□ -1.7
CD46-217ENST00000493796 APEHP13798 732 aaKnown RBP4.45□□□□□ -1.7
CD46-217ENST00000493796 SLC5A1P13866 664 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 CD19P15391 556 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 PHKG2P15735 406 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 MCM5P33992 734 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 CASP5P51878 434 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 COPB1P53618 953 aaKnown RBP4.45□□□□□ -1.7
CD46-217ENST00000493796 FAM187BQ17R55 369 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 COBLL1Q53SF7 1204 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 MTX3Q5HYI7 312 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 YTHDF3Q7Z739 585 aaKnown RBP4.45□□□□□ -1.7
CD46-217ENST00000493796 LINC01465Q8N7H1 131 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 C11orf44Q8N8P7 122 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 ATP11CQ8NB49 1132 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 ADAMTS18Q8TE60 1221 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 IQCDQ96DY2 449 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 FAM227BQ96M60 508 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 C5orf34Q96MH7 638 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 SH2D3AQ9BRG2 576 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 QTRT1Q9BXR0 403 aaKnown RBP4.45□□□□□ -1.7
CD46-217ENST00000493796 ZCWPW1Q9H0M4 648 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 AS3MTQ9HBK9 375 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 STEAP1Q9UHE8 339 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 SLC27A6Q9Y2P4 619 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 ARHGEF11O15085 1522 aa4.45□□□□□ -1.7
CD46-217ENST00000493796 SAMD9Q5K651 1589 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 A0A087WZ62 844 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 WDR91A4D1P6 747 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 POM121BA6NF01 834 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 CLCA1A8K7I4 914 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 SNX2O60749 519 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 TRIM27P14373 513 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 TSHRP16473 764 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 KELP23276 732 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 LMO1P25800 156 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 RBL1P28749 1068 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 COPAP53621 1224 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 CLCA4Q14CN2 919 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 SAFBQ15424 915 aaKnown RBP eCLIP4.44□□□□□ -1.7
CD46-217ENST00000493796 ST3GAL2Q16842 350 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 C4orf46Q504U0 113 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 KLHDC7AQ5VTJ3 777 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 RRAGBQ5VZM2 374 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 ZNF626Q68DY1 528 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 SLC18B1Q6NT16 456 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 CLEC9AQ6UXN8 241 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 KRT28Q7Z3Y7 464 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 GALNT16Q8N428 558 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 RNF152Q8N8N0 203 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 CCDC17Q96LX7 622 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 C1QTNF7Q9BXJ2 289 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 SLC29A3Q9BZD2 475 aa4.44□□□□□ -1.7
CD46-217ENST00000493796 HEYLQ9NQ87 328 aaPredicted RBP4.44□□□□□ -1.7
CD46-217ENST00000493796 GAR1Q9NY12 217 aaKnown RBP4.44□□□□□ -1.7
CD46-217ENST00000493796 ZNF70Q9UC06 446 aaPredicted RBP4.44□□□□□ -1.7
CD46-217ENST00000493796 ADCY10Q96PN6 1610 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 COL15A1P39059 1388 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 KIAA0586Q9BVV6 1533 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 UGGT2Q9NYU1 1516 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 H3BNC9 293 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 APAF1O14727 1248 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 AREL1O15033 823 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 GCATO75600 419 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 HTR7P34969 479 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 PRIM2P49643 509 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 ZNF81P51508 661 aa4.43□□□□□ -1.7
CD46-217ENST00000493796 EIF4A1P60842 406 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms