RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 PNMA6AP0CW24 399 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 SETSIPP0DME0 302 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 IRF1P10914 325 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 LCP1P13796 627 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 PFKLP17858 780 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 GNA15P30679 374 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 SOX9P48436 509 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 RGS7P49802 495 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZNF165P49910 485 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 TKTL1P51854 596 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 KIF11P52732 1056 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 COPB1P53618 953 aaKnown RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 PLCB2Q00722 1185 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 TNK2Q07912 1038 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 FCHO2Q0JRZ9 810 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 SPEM2Q0P670 501 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 MTAPQ13126 283 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZNF268Q14587 947 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 MTF1Q14872 753 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 STILQ15468 1287 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 CNGA2Q16280 664 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 TRIM68Q6AZZ1 485 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 LCLAT1Q6UWP7 414 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZNF852Q6ZMS4 543 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 RSRC2Q7L4I2 434 aaKnown RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 FAM126AQ9BYI3 521 aaPredicted RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 ULBP1Q9BZM6 244 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 RNF38Q9H0F5 515 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 SIX2Q9NPC8 291 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 TRPV5Q9NQA5 729 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 DUS2Q9NX74 493 aaKnown RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 GTSE1Q9NYZ3 720 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 IL37Q9NZH6 218 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 CFAP97Q9P2B7 532 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 NAGPAQ9UK23 515 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 NUDT5Q9UKK9 219 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 NDRG2Q9UN36 371 aaKnown RBP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 ARHGAP26Q9UNA1 814 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 WNT6Q9Y6F9 365 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 PIAS3Q9Y6X2 628 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 TICRRQ7Z2Z1 1910 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 PATJQ8NI35 1801 aa10.95□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZBED1O96006 694 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 RALAP11233 206 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 RARGP13631 454 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 ATP5C1P36542 298 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 PGFP49763 221 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZNF132P52740 706 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 UBXN1Q04323 297 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 PTK2Q05397 1052 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 ADIGQ0VDE8 80 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 KCNMA1Q12791 1236 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 USP4Q13107 963 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 DRAP1Q14919 205 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 C10orf120Q5SQS8 335 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 CCDC186Q7Z3E2 898 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 DDX42Q86XP3 938 aaKnown RBP eCLIP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 RIN3Q8TB24 985 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 NETO1Q8TDF5 533 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 NDRG1Q92597 394 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZSWIM1Q9BR11 485 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 UBXN6Q9BZV1 441 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 PDCL3Q9H2J4 239 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 EBF3Q9H4W6 596 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 ACP6Q9NPH0 428 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 ST7Q9NRC1 585 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 FAM207AQ9NSI2 230 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 LIMA1Q9UHB6 759 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 AJAP1Q9UKB5 411 aaPredicted RBP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 MRPS17Q9Y2R5 130 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 SH3BP1Q9Y3L3 701 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 FHOD1Q9Y613 1164 aa10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 CNOT1A5YKK6 2376 aaKnown RBP10.94□□□□□ -0.66
TRAPPC12-222ENST00000493792 F5P12259 2224 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 FAM92AA1XBS5 289 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 FOXN3O00409 490 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 MAN2B1O00754 1011 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 TM4SF5O14894 197 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 MDM4O15151 490 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 NCAM2O15394 837 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 GDF9O60383 454 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 TBX18O95935 607 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 ATP1A3P13637 1013 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 ARSAP15289 507 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 PMLP29590 882 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 KLK7P49862 253 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 MLLT6P55198 1093 aaPredicted RBP10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 YWHAGP61981 247 aaKnown RBP eCLIP10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 TPM4P67936 248 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 SLC7A9P82251 487 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 GOLGA8FQ08AF8 430 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 GOLGA8DPQ0D2H9 430 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 RUNX3Q13761 415 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 NCAPHQ15003 741 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 PDGFRLQ15198 375 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 SYCP1Q15431 976 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 ZNF77Q15935 545 aa10.93□□□□□ -0.66
TRAPPC12-222ENST00000493792 LPAL2Q16609 132 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms