RNA–Protein interactions for RNA: ENST00000493674.5

VPS52-220, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 878 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-220ENST00000493674 SLC25A52Q3SY17 297 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 RAB6CQ53S08 254 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 SH3PXD2AQ5TCZ1 1133 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 SDHAF4Q5VUM1 108 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 SYPL2Q5VXT5 272 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 TXNRD3NBQ6F5E7 133 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 DENND5BQ6ZUT9 1274 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 ACTRT1Q8TDG2 376 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 FAM172AQ8WUF8 416 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 KLHL5Q96PQ7 755 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 TGS1Q96RS0 853 aaKnown RBP13.23□□□□□ -0.29
VPS52-220ENST00000493674 PEBP4Q96S96 227 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 PSMB7Q99436 277 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 SEPT5Q99719 369 aaPredicted RBP13.23□□□□□ -0.29
VPS52-220ENST00000493674 TRIM62Q9BVG3 475 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 RAB6CQ9H0N0 254 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 ALG13Q9NP73 1137 aaKnown RBP13.23□□□□□ -0.29
VPS52-220ENST00000493674 TLR9Q9NR96 1032 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 RRN3Q9NYV6 651 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 MSRAQ9UJ68 235 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 FBXW11Q9UKB1 542 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 USTQ9Y2C2 406 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 YIPF1Q9Y548 306 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 DENND4AQ7Z401 1863 aa13.23□□□□□ -0.29
VPS52-220ENST00000493674 C2orf71A6NGG8 1288 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 SLC38A8A6NNN8 435 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 H3BNC9 293 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 GRM6O15303 877 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 RNF8O76064 485 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 TRUB2O95900 331 aaKnown RBP13.22□□□□□ -0.29
VPS52-220ENST00000493674 PTPN7P35236 360 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 PBX2P40425 430 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 PGFP49763 221 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 RWDD2BP57060 319 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 PITX1P78337 314 aaPredicted RBP13.22□□□□□ -0.29
VPS52-220ENST00000493674 TAZQ16635 292 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 MGAT5BQ3V5L5 792 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 ZNF697Q5TEC3 545 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 BSPRYQ5W0U4 402 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 MSANTD2Q6P1R3 559 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 MON1AQ86VX9 555 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 ZNF276Q8N554 614 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 MRPL43Q8N983 215 aaKnown RBP13.22□□□□□ -0.29
VPS52-220ENST00000493674 STKLD1Q8NE28 680 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 EXD1Q8NHP7 514 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 FAM71BQ8TC56 605 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 POF1BQ8WVV4 589 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 TEKT4Q8WW24 435 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 FAM149B1Q96BN6 582 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 TRMT2BQ96GJ1 504 aaKnown RBP13.22□□□□□ -0.29
VPS52-220ENST00000493674 LRCH3Q96II8 777 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 MYRFLQ96LU7 910 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 TBCBQ99426 244 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 TCF25Q9BQ70 676 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 PBX4Q9BYU1 374 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 NMUR1Q9HB89 426 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 NGRNQ9NPE2 291 aaKnown RBP13.22□□□□□ -0.29
VPS52-220ENST00000493674 NAALADL1Q9UQQ1 740 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.22□□□□□ -0.29
VPS52-220ENST00000493674 INSL5Q9Y5Q6 135 aa13.22□□□□□ -0.29
VPS52-220ENST00000493674 KIF26AQ9ULI4 1882 aaPredicted RBP13.22□□□□□ -0.29
VPS52-220ENST00000493674 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.21□□□□□ -0.29
VPS52-220ENST00000493674 HIDE1A8MVS5 230 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 CXCL14O95715 111 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 ADH1AP07327 375 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 KRT7P08729 469 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 PYGMP11217 842 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 HMGA1P17096 107 aaKnown RBP13.21□□□□□ -0.29
VPS52-220ENST00000493674 YWHAQP27348 245 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 PSEN1P49768 467 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 SULT1E1P49888 294 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 DNA2P51530 1060 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 ARSEP51690 589 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 YWHAGP61981 247 aaKnown RBP eCLIP13.21□□□□□ -0.29
VPS52-220ENST00000493674 ATP11AP98196 1134 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 CKAP4Q07065 602 aaKnown RBP13.21□□□□□ -0.29
VPS52-220ENST00000493674 DCAF6Q58WW2 860 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 SNX30Q5VWJ9 437 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 PDE12Q6L8Q7 609 aaKnown RBP13.21□□□□□ -0.29
VPS52-220ENST00000493674 TMC7Q7Z402 723 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 ARHGAP18Q8N392 663 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 CEP112Q8N8E3 955 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 LRRN4CLQ8ND94 238 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 CMASQ8NFW8 434 aaPredicted RBP13.21□□□□□ -0.29
VPS52-220ENST00000493674 OVCA2Q8WZ82 227 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 MS4A14Q96JA4 679 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 CAPZA3Q96KX2 299 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 CARD6Q9BX69 1037 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 SMOC2Q9H3U7 446 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 WDR6Q9NNW5 1121 aaKnown RBP13.21□□□□□ -0.29
VPS52-220ENST00000493674 ENTPD7Q9NQZ7 604 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 OSER1Q9NX31 292 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 DDX56Q9NY93 547 aaKnown RBP13.21□□□□□ -0.29
VPS52-220ENST00000493674 CLIC5Q9NZA1 410 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 EHD2Q9NZN4 543 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 STAP1Q9ULZ2 295 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 USP18Q9UMW8 372 aa13.21□□□□□ -0.29
VPS52-220ENST00000493674 NYNRINQ9P2P1 1898 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms