RNA–Protein interactions for RNA: ENST00000493618.5

ATG4B-223, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-223ENST00000493618 EBF1Q9UH73 591 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 LAMA1P25391 3075 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 PLXND1Q9Y4D7 1925 aa15.45■□□□□ 0.06
ATG4B-223ENST00000493618 SGK1O00141 431 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 CHRM1P11229 460 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-223ENST00000493618 RARGP13631 454 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 GBP1P32455 592 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 ATP5C1P36542 298 aaKnown RBP15.44■□□□□ 0.06
ATG4B-223ENST00000493618 MRPS21P82921 87 aaKnown RBP15.44■□□□□ 0.06
ATG4B-223ENST00000493618 CBWD6Q4V339 395 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 CBWD3Q5JTY5 395 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 CBWD5Q5RIA9 395 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 BTBD8Q5XKL5 378 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 C12orf50Q8NA57 414 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-223ENST00000493618 IL17RCQ8NAC3 791 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 FBXL13Q8NEE6 735 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 ENGASEQ8NFI3 743 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 MDGA1Q8NFP4 955 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 CCDC26Q8TAB7 109 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 SMARCE1Q969G3 411 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 OTUB2Q96DC9 234 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 LOXL4Q96JB6 756 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 ZC3H10Q96K80 434 aaKnown RBP15.44■□□□□ 0.06
ATG4B-223ENST00000493618 TSG101Q99816 390 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 DUSP16Q9BY84 665 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 CISHQ9NSE2 258 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 RAB20Q9NX57 234 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 NAGPAQ9UK23 515 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 CIZ1Q9ULV3 898 aaPredicted RBP15.44■□□□□ 0.06
ATG4B-223ENST00000493618 PCDHA5Q9Y5H7 936 aa15.44■□□□□ 0.06
ATG4B-223ENST00000493618 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-223ENST00000493618 SLC30A4O14863 429 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 STX10O60499 249 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 GREM1O60565 184 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 TULP3O75386 442 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 BCKDHBP21953 392 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 KCNA4P22459 653 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 MPLP40238 635 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 EIF2DP41214 584 aaKnown RBP15.43■□□□□ 0.06
ATG4B-223ENST00000493618 GRIA2P42262 883 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 KIR2DL1P43626 348 aaPredicted RBP15.43■□□□□ 0.06
ATG4B-223ENST00000493618 KIF11P52732 1056 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 RAD23BP54727 409 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 CREB5Q02930 508 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 CRY1Q16526 586 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 C10orf120Q5SQS8 335 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 TCEAL6Q6IPX3 200 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 TPGS1Q6ZTW0 290 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 SCD5Q86SK9 330 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 ETFBKMTQ8IXQ9 262 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 SLC4A11Q8NBS3 891 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 TCEAL3Q969E4 200 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 ERLEC1Q96DZ1 483 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 TMEM176AQ96HP8 235 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 CYLDQ9NQC7 956 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.43■□□□□ 0.06
ATG4B-223ENST00000493618 ADAMTS9Q9P2N4 1935 aa15.43■□□□□ 0.06
ATG4B-223ENST00000493618 TBC1D3BA6NDS4 549 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 NEDD8-MDP1E9PL57 170 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 HOXC11O43248 304 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-223ENST00000493618 ADAM23O75077 832 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 RHOBTB1O94844 696 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 SMC2O95347 1197 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 HMBSP08397 361 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 ZNF806P0C7X5 589 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 WASP42768 502 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 TNFRSF4P43489 277 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 MCCD1P59942 119 aaPredicted RBP15.42■□□□□ 0.06
ATG4B-223ENST00000493618 NUCB2P80303 420 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 LRMPQ12912 555 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 ELF2Q15723 593 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 USP39Q53GS9 565 aaKnown RBP15.42■□□□□ 0.06
ATG4B-223ENST00000493618 PLA2G2CQ5R387 149 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 C10orf76Q5T2E6 689 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 HTR3DQ70Z44 454 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 RASSF3Q86WH2 238 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 MIB1Q86YT6 1006 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 RLN3Q8WXF3 142 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 BHMTQ93088 406 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 CNOT6LQ96LI5 555 aaKnown RBP15.42■□□□□ 0.06
ATG4B-223ENST00000493618 GSDMAQ96QA5 445 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 DNAI2Q9GZS0 605 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 PNPLA8Q9NP80 782 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 DNAJC17Q9NVM6 304 aaKnown RBP15.42■□□□□ 0.06
ATG4B-223ENST00000493618 BCCIPQ9P287 314 aaKnown RBP eCLIP15.42■□□□□ 0.06
ATG4B-223ENST00000493618 DEC1Q9P2X7 70 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 RASAL2Q9UJF2 1139 aa15.42■□□□□ 0.06
ATG4B-223ENST00000493618 LSM7Q9UK45 103 aaKnown RBP15.42■□□□□ 0.06
ATG4B-223ENST00000493618 A0A0A0MRY4 1105 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 TCRBV21S2A2A0A5A6 115 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 SLC16A3O15427 465 aaKnown RBP15.41■□□□□ 0.06
ATG4B-223ENST00000493618 TYRP14679 529 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 GOLGA8FQ08AF8 430 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 GOLGA8DPQ0D2H9 430 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 GOLGA7BQ2TAP0 167 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 PPM1JQ5JR12 505 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 EOGTQ5NDL2 527 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 GRAMD4Q6IC98 578 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 CCDC186Q7Z3E2 898 aa15.41■□□□□ 0.06
ATG4B-223ENST00000493618 ZC3H3Q8IXZ2 948 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms