RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 HSFX1Q9UBD0 423 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 LZTS1Q9Y250 596 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 PCDHA11Q9Y5I1 949 aa14.73□□□□□ -0.05
PDZRN3-210ENST00000492909 PLXNA3P51805 1871 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 RHOXF2BP0C7M4 288 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 ATF2P15336 505 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 CA8P35219 290 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 NOS2P35228 1153 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 GJC1P36383 396 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 TUFMP49411 452 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 RAB33AQ14088 237 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 DCAF6Q58WW2 860 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 SDHAF4Q5VUM1 108 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 HFE2Q6ZVN8 426 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 BHLHA9Q7RTU4 235 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 TMC7Q7Z402 723 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 POLNQ7Z5Q5 900 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 ARFGAP1Q8N6T3 406 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 ACTRT1Q8TDG2 376 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 FAM172AQ8WUF8 416 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 MS4A14Q96JA4 679 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 SPATA17Q96L03 361 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 SLC2A13Q96QE2 648 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 NCAPGQ9BPX3 1015 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 RHOXF2Q9BQY4 288 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 TRIM62Q9BVG3 475 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 NGRNQ9NPE2 291 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 MSRAQ9UJ68 235 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 STAP1Q9ULZ2 295 aa14.72□□□□□ -0.05
PDZRN3-210ENST00000492909 SZT2Q5T011 3432 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 CHD7Q9P2D1 2997 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 CAPN9O14815 690 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 POLR3GO15318 223 aaPredicted RBP14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 LILRB3O75022 631 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 SOAT2O75908 522 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 KRT7P08729 469 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 TCF4P15884 667 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 VSNL1P62760 191 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 ZNF211Q13398 564 aaPredicted RBP14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 SLC25A52Q3SY17 297 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 SH3PXD2AQ5TCZ1 1133 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 SEL1L2Q5TEA6 688 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 WDR93Q6P2C0 686 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 DENND5BQ6ZUT9 1274 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 KATNAL2Q8IYT4 538 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 RASGEF1CQ8N431 466 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 NOA1Q8NC60 698 aaKnown RBP14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 TIFAQ96CG3 184 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 RPGRIP1Q96KN7 1286 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 CEP295NLQ96MC4 621 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 C11orf84Q9BUA3 381 aaPredicted RBP14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 CERS4Q9HA82 394 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 RXFP1Q9HBX9 757 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 ALG13Q9NP73 1137 aaKnown RBP14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 USP18Q9UMW8 372 aa14.71□□□□□ -0.05
PDZRN3-210ENST00000492909 C5orf67F2Z3F1 127 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 PGRMC1O00264 195 aaKnown RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 PDE2AO00408 941 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 TEX28O15482 410 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 RTN3O95197 1032 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 PYGMP11217 842 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 MIPP30301 263 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 SLC25A11Q02978 314 aaKnown RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 RAB30Q15771 203 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 CLUL1Q15846 466 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 ZFYVE27Q5T4F4 411 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 BSPRYQ5W0U4 402 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 CENPIQ92674 756 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 C17orf80Q9BSJ5 609 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 DDX56Q9NY93 547 aaKnown RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 EHD2Q9NZN4 543 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 MTUS1Q9ULD2 1270 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 TTC7AQ9ULT0 858 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 MAFFQ9ULX9 164 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 SCML2Q9UQR0 700 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 PRPSAP2O60256 369 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 CXCL14O95715 111 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 FYNP06241 537 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 RB1P06400 928 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 NCAM1P13591 858 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 SULT1E1P49888 294 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 UBE3AQ05086 875 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 SYPL2Q5VXT5 272 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 BEND5Q7L4P6 421 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 STRADAQ7RTN6 431 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 ZNF572Q7Z3I7 529 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 STKLD1Q8NE28 680 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 EXD1Q8NHP7 514 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 GPR152Q8TDT2 470 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 NT5C3BQ969T7 300 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 TBCBQ99426 244 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 NPY6RQ99463 290 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 TCF25Q9BQ70 676 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 ZWILCHQ9H900 591 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 CYP4F11Q9HBI6 524 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 ENTPD7Q9NQZ7 604 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 COMMD8Q9NX08 183 aa14.7□□□□□ -0.06
PDZRN3-210ENST00000492909 RRN3Q9NYV6 651 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms