RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 MTRF1O75570 445 aaKnown RBP10.04□□□□□ -0.8
VPS8-225ENST00000492449 FDX1P10109 184 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 PSMC2P35998 433 aaKnown RBP10.04□□□□□ -0.8
VPS8-225ENST00000492449 GRSF1Q12849 480 aaKnown RBP eCLIP10.04□□□□□ -0.8
VPS8-225ENST00000492449 TCHHL1Q5QJ38 904 aaPredicted RBP10.04□□□□□ -0.8
VPS8-225ENST00000492449 XKR5Q6UX68 686 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 ANKRD13BQ86YJ7 626 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 IFNLR1Q8IU57 520 aaPredicted RBP10.04□□□□□ -0.8
VPS8-225ENST00000492449 LILRA2Q8N149 483 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 FIBCD1Q8N539 461 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 HPS1Q92902 700 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 ATP2A3Q93084 1043 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 E2F7Q96AV8 911 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 CCDC124Q96CT7 223 aaKnown RBP10.04□□□□□ -0.8
VPS8-225ENST00000492449 BTBD6Q96KE9 485 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 GPR101Q96P66 508 aaPredicted RBP10.04□□□□□ -0.8
VPS8-225ENST00000492449 TRIM56Q9BRZ2 755 aaKnown RBP10.04□□□□□ -0.8
VPS8-225ENST00000492449 C1orf50Q9BV19 199 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 ANKRD60Q9BZ19 345 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 PARVGQ9HBI0 331 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 PCDHGA11Q9Y5H2 935 aa10.04□□□□□ -0.8
VPS8-225ENST00000492449 A0A1W2PQ67 120 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 TBKBP1A7MCY6 615 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 UBAP1LF5GYI3 381 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 DYNC1LI2O43237 492 aaPredicted RBP10.03□□□□□ -0.8
VPS8-225ENST00000492449 ENO2P09104 434 aaPredicted RBP10.03□□□□□ -0.8
VPS8-225ENST00000492449 KRT6CP48668 564 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 KRT76Q01546 638 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 MTMR2Q13614 643 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 SBK1Q52WX2 424 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 CES4AQ5XG92 561 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 PPP4R4Q6NUP7 873 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 IGFN1Q86VF2 1251 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 REXO1Q8N1G1 1221 aaKnown RBP10.03□□□□□ -0.8
VPS8-225ENST00000492449 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 LMO3Q8TAP4 145 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 SERAC1Q96JX3 654 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 WRNIP1Q96S55 665 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 PCDHB18PQ96TA0 734 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 ZFYVE28Q9HCC9 887 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 VPS51Q9UID3 782 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 NOCTQ9UK39 431 aaKnown RBP10.03□□□□□ -0.8
VPS8-225ENST00000492449 POU2F3Q9UKI9 436 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 DNAJC16Q9Y2G8 782 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 E7ESA3 106 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 hCG_1984214I3L0E3 225 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 TEX28O15482 410 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 FOXD2O60548 495 aaPredicted RBP10.03□□□□□ -0.8
VPS8-225ENST00000492449 GUCY1B2O75343 617 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 S100BP04271 92 aaPredicted RBP10.03□□□□□ -0.8
VPS8-225ENST00000492449 GLRA2P23416 452 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 SUZ12Q15022 739 aaKnown RBP10.03□□□□□ -0.8
VPS8-225ENST00000492449 FAM47AQ5JRC9 791 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 GRAMD2AQ8IUY3 354 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 GOLM1Q8NBJ4 401 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 HIPK4Q8NE63 616 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 PDZD8Q8NEN9 1154 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 ANGPTL6Q8NI99 470 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 TRIB2Q92519 343 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 APBB2Q92870 758 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 FAM89AQ96GI7 184 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 RILPQ96NA2 401 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 RTKNQ9BST9 563 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 MKNK2Q9HBH9 465 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 LRP2BPQ9P2M1 347 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 CDC14AQ9UNH5 594 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 IKBKGQ9Y6K9 419 aa10.03□□□□□ -0.8
VPS8-225ENST00000492449 ARHGEF37A1IGU5 675 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 GOLGA8RI6L899 631 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 UFL1O94874 794 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 ERBB2P04626 1255 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 CD247P20963 164 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 TFDP1Q14186 410 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 ARHGEF6Q15052 776 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 ZYXQ15942 572 aaKnown RBP10.02□□□□□ -0.8
VPS8-225ENST00000492449 AARS2Q5JTZ9 985 aaKnown RBP10.02□□□□□ -0.8
VPS8-225ENST00000492449 HEATR4Q86WZ0 1026 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 FAM20CQ8IXL6 584 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 HCAR2Q8TDS4 363 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 TFB1MQ8WVM0 346 aaKnown RBP10.02□□□□□ -0.8
VPS8-225ENST00000492449 WNK4Q96J92 1243 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 NPLQ9BXD5 320 aaPredicted RBP10.02□□□□□ -0.8
VPS8-225ENST00000492449 FRMD8Q9BZ67 464 aaPredicted RBP10.02□□□□□ -0.8
VPS8-225ENST00000492449 HOXD1Q9GZZ0 328 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 KLHL25Q9H0H3 589 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 FAM96AQ9H5X1 160 aa10.02□□□□□ -0.8
VPS8-225ENST00000492449 DHX33Q9H6R0 707 aaKnown RBP10.02□□□□□ -0.8
VPS8-225ENST00000492449 E9PMD0 336 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 M0QX08 132 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 SCO2O43819 266 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 STAM2O75886 525 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 ABCB1P08183 1280 aaPredicted RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 EIF2AK2P19525 551 aaKnown RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 ITGADQ13349 1161 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 ABCB5Q2M3G0 1257 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 ESCO1Q5FWF5 840 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 GJC2Q5T442 439 aaPredicted RBP10.02□□□□□ -0.81
VPS8-225ENST00000492449 DENND5BQ6ZUT9 1274 aa10.02□□□□□ -0.81
VPS8-225ENST00000492449 ARCQ7LC44 396 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms