RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 ZNF623O75123 536 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 ZMYND10O75800 440 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 LTFP02788 710 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CSH1P0DML2 217 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CSH2P0DML3 217 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 COMTP21964 271 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 BMPR1AP36894 532 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CLCN6P51797 869 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 SMAD3P84022 425 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 PDCLQ13371 301 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 NAB2Q15742 525 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CNGA2Q16280 664 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 KRT71Q3SY84 523 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 LRRC23Q53EV4 343 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 ZC3H12AQ5D1E8 599 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 RTP2Q5QGT7 225 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TMEM240Q5SV17 173 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 C10orf76Q5T2E6 689 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 FBXO38Q6PIJ6 1188 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 WDR59Q6PJI9 974 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 OSTM1Q86WC4 334 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 NUP93Q8N1F7 819 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 DNAAF3Q8N9W5 541 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC110Q8TBZ0 833 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TFAP2BQ92481 460 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 AGAP3Q96P47 875 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 KRT12Q99456 494 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 EIF3CQ99613 913 aaKnown RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 KLHL8Q9P2G9 620 aaPredicted RBP4.67□□□□□ -1.66
TRA2B-215ENST00000492417 TBX21Q9UL17 535 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 MAD1L1Q9Y6D9 718 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 DLEC1Q9Y238 1755 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 KIF13BQ9NQT8 1826 aa4.67□□□□□ -1.66
TRA2B-215ENST00000492417 SSU72P8A0A1W2PR75 194 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 LCHNA4D1U4 455 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 EEF2KO00418 725 aaKnown RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TXNDC9O14530 226 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 PIGRP01833 764 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 RARGP13631 454 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ATP5C1P36542 298 aaKnown RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SLC11A2P49281 568 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SH3BGRP55822 239 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TBX4P57082 545 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ROR1Q01973 937 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 IFT88Q13099 833 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ANKRD33Q7Z3H0 272 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ZNF677Q86XU0 584 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 RHOT1Q8IXI2 618 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ARL14EPQ8N8R7 260 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ANKRD52Q8NB46 1076 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 COLGALT1Q8NBJ5 622 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 GDAP1Q8TB36 358 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SPPL2BQ8TCT7 592 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 C1orf54Q8WWF1 131 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SHC3Q92529 594 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 MCUR1Q96AQ8 359 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC97Q96F63 343 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CFHR5Q9BXR6 569 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 MFSD1Q9H3U5 465 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SMARCAL1Q9NZC9 954 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 GMIPQ9P107 970 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CNTN3Q9P232 1028 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 VANGL2Q9ULK5 521 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 DERAQ9Y315 318 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 RWDD3Q9Y3V2 267 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ALG6Q9Y672 507 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ITIH6Q6UXX5 1313 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TRIM66O15016 1216 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CHUKO15111 745 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 MAPK13O15264 365 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CILPO75339 1184 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CIB2O75838 187 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 BAIAP3O94812 1187 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TBX18O95935 607 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 KRT7P08729 469 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 PAEPP09466 180 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 PYGBP11216 843 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 FOSL2P15408 326 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CYP3A5P20815 502 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SAT1P21673 171 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ITGB8P26012 769 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 SLC5A3P53794 718 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 RAD23BP54727 409 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 ST8SIA6P61647 398 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 HECTD3Q5T447 861 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 GKAP1Q5VSY0 366 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 FAM109BQ6ICB4 259 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TAS1R1Q7RTX1 841 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 GRASPQ7Z6J2 395 aaPredicted RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 DENND1CQ8IV53 801 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CCDC63Q8NA47 563 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 MYCBPAPQ8TBZ2 947 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 P3H4Q92791 437 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 CELF6Q96J87 481 aaKnown RBP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 LACRTQ9GZZ8 138 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 MAN1C1Q9NR34 630 aa4.66□□□□□ -1.66
TRA2B-215ENST00000492417 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.66□□□□□ -1.66
TRA2B-215ENST00000492417 TXNDC16Q9P2K2 825 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms