RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 COPEO14579 308 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 KIF1CO43896 1103 aaKnown RBP16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 CDC25CP30307 473 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 RGS7P49802 495 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 BCAR1P56945 870 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 CA9Q16790 459 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 BOLA3Q53S33 107 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 CTAGE3PQ8IX95 158 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 C12orf29Q8N999 325 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 TEKT4Q8WW24 435 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 USP6NLQ92738 828 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 NAF1Q96HR8 494 aaKnown RBP16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 PPP1R16BQ96T49 567 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 FDXACB1Q9BRP7 624 aaPredicted RBP16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 TUBB6Q9BUF5 446 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 TXNRD2Q9NNW7 524 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 SMYD2Q9NRG4 433 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 ETNK2Q9NVF9 386 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 PPP1R1BQ9UD71 204 aaPredicted RBP16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 DNAJC25-GNG10A0A024R161 153 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 KRT37O76014 449 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 MAP3K6O95382 1288 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 ZBED1O96006 694 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 SNRPAP09012 282 aaKnown RBP16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 NEFHP12036 1026 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 ARF4P18085 180 aaPredicted RBP16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 OSBPP22059 807 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 ABL2P42684 1182 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 IGBP1P78318 339 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 POU5F1BQ06416 359 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 KRT72Q14CN4 511 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 SCYL2Q6P3W7 929 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 OLFML1Q6UWY5 402 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 KHSRPQ92945 711 aaKnown RBP eCLIP16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 MIS12Q9H081 205 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 KLC2Q9H0B6 622 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 KIAA1257Q9ULG3 409 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 PLXNA1Q9UIW2 1896 aa16.75■□□□□ 0.27
SEMA4D-220ENST00000492386 H0Y3Z8 333 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 TRDMT1O14717 391 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 GSC2O15499 205 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 RFPL1O75677 317 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 APRTP07741 180 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 TXNP10599 105 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 MYL2P10916 166 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 MRPS5P82675 430 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 GOLGA7BQ2TAP0 167 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 PMF1Q6P1K2 205 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 IFNLR1Q8IU57 520 aaPredicted RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 FAM172AQ8WUF8 416 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 LRRN4Q8WUT4 740 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 SNRNP25Q9BV90 132 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 NT5C1AQ9BXI3 368 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 NGRNQ9NPE2 291 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 PDGFCQ9NRA1 345 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 ITGA11Q9UKX5 1188 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 PLLPQ9Y342 182 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 FAM237BA0A1B0GVD1 139 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 SLC15A5A6NIM6 579 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 IRF6O14896 467 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 UGT1A9O60656 530 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 STAU1O95793 577 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 SLC25A27O95847 323 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 INSRRP14616 1297 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 CCNFP41002 786 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 PTDSS1P48651 473 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 RBP5P82980 135 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 ZBTB16Q05516 673 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 KHDC1Q4VXA5 237 aaKnown RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 DSTYKQ6XUX3 929 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 TTC7BQ86TV6 843 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 LINC01465Q8N7H1 131 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 CCDC110Q8TBZ0 833 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 OXNAD1Q96HP4 312 aaPredicted RBP16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 DCLRE1BQ9H816 532 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 UGT1A7Q9HAW7 530 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 UGT1A10Q9HAW8 530 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 UGT1A8Q9HAW9 530 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 DPP3Q9NY33 737 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 ERAP1Q9NZ08 941 aa16.74■□□□□ 0.27
SEMA4D-220ENST00000492386 A0A0G2JLL6 359 aaPredicted RBP16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 MAGEA3P43357 314 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 Q3C1V9 767 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 PKDCCQ504Y2 493 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 CES4AQ5XG92 561 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 FAM91A1Q658Y4 838 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 UNC5AQ6ZN44 842 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 RINLQ6ZS11 566 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 ZNF534Q76KX8 674 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 PRRT2Q7Z6L0 340 aaPredicted RBP16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 MCUQ8NE86 351 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 TBCBQ99426 244 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 MECRQ9BV79 373 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 IQCGQ9H095 443 aaKnown RBP16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 FAM124BQ9H5Z6 455 aaPredicted RBP16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 SCN1AP35498 2009 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 FCHO1O14526 889 aa16.73■□□□□ 0.27
SEMA4D-220ENST00000492386 GABBR2O75899 941 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms