RNA–Protein interactions for RNA: ENST00000492234.5

AGAP3-223, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-223	ENST00000492234	DEPDC1B	Q8WUY9	529 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	IRGQ	Q8WZA9	623 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	RSPRY1	Q96DX4	576 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	SMOC2	Q9H3U7	446 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	HAUS4	Q9H6D7	363 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	BRD9	Q9H8M2	597 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	KIF9	Q9HAQ2	790 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	GKN1	Q9NS71	199 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	OBP2A	Q9NY56	170 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	CLIC5	Q9NZA1	410 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	TJP2	Q9UDY2	1190 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	RASAL2	Q9UJF2	1139 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	DNMT3L	Q9UJW3	386 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	ARHGAP26	Q9UNA1	814 aa		13.79	□□□□□ -0.2
AGAP3-223	ENST00000492234	TTC28	Q96AY4	2481 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	LEFTY2	O00292	366 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	PAPSS1	O43252	624 aa	Predicted RBP	13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	SART1	O43290	800 aa	Known RBP	13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	LTF	P02788	710 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	ERBB2	P04626	1255 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	IRF1	P10914	325 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	ALAD	P13716	330 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	CDH5	P33151	784 aa	Predicted RBP	13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	RPL34	P49207	117 aa	Known RBP	13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	ZNF75D	P51815	510 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	ZXDA	P98168	799 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	TSR1	Q2NL82	804 aa	Known RBP	13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	PTPN20	Q4JDL3	420 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	MIB1	Q86YT6	1006 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	UBALD2	Q8IYN6	164 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	SLC30A5	Q8TAD4	765 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	C18orf8	Q96DM3	657 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	LRRC3B	Q96PB8	259 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	PCDHB18P	Q96TA0	734 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	ABCC13	Q9NSE7	274 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	CFAP97	Q9P2B7	532 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	FBXL21	Q9UKT6	434 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	STRIP2	Q9ULQ0	834 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	SH3BP1	Q9Y3L3	701 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	VCAN	P13611	3396 aa		13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	NUP210	Q8TEM1	1887 aa	Predicted RBP	13.78	□□□□□ -0.2
AGAP3-223	ENST00000492234	DLL1	O00548	723 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	CAPN9	O14815	690 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	OLFM2	O95897	454 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	CYP1A1	P04798	512 aa	Predicted RBP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	HMBS	P08397	361 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	SRF	P11831	508 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	NCAM1	P13591	858 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	NSF	P46459	744 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	RNASE9	P60153	205 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	NOMO3	P69849	1222 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	GOLGA8F	Q08AF8	430 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	GOLGA8DP	Q0D2H9	430 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	CLEC16A	Q2KHT3	1053 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	C2CD6	Q53TS8	623 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	TDRD12	Q587J7	1177 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	EFHC1	Q5JVL4	640 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	E4F1	Q66K89	784 aa	Predicted RBP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	FAM183BP	Q6ZVS7	135 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	BHLHA9	Q7RTU4	235 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	PHLDB2	Q86SQ0	1253 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	DRC7	Q8IY82	874 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	SYN2	Q92777	582 aa	Predicted RBP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	ZFYVE19	Q96K21	471 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	OLA1	Q9NTK5	396 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	MARCH2	Q9P0N8	246 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	SFMBT1	Q9UHJ3	866 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	DUSP12	Q9UNI6	340 aa		13.77	□□□□□ -0.21
AGAP3-223	ENST00000492234	SLC12A8	A0AV02	714 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	TMCO5B	A8MYB1	307 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	GOLGA8S	H3BPF8	625 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	SCAMP3	O14828	347 aa	Known RBP	13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	CHAD	O15335	359 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	GRAP2	O75791	330 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	SERPING1	P05155	500 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	IFNAR2	P48551	515 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	ADK	P55263	362 aa	Known RBP	13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	YWHAZ	P63104	245 aa	Known RBP	13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	ZXDB	P98169	803 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	SLC6A3	Q01959	620 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	MTF1	Q14872	753 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	ZNF77	Q15935	545 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	ARHGAP29	Q52LW3	1261 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	KLHDC10	Q6PID8	442 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	MMS22L	Q6ZRQ5	1243 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	TOGARAM2	Q6ZUX3	1019 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	ZNF276	Q8N554	614 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	OR8K1	Q8NGG5	319 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	TTC8	Q8TAM2	541 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	CSGALNACT1	Q8TDX6	532 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	EDA	Q92838	391 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	IRF7	Q92985	503 aa		13.76	□□□□□ -0.21
AGAP3-223	ENST00000492234	TRIM62	Q9BVG3	475 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms