RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 FSIP1Q8NA03 581 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 LARP4BQ92615 738 aaKnown RBP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 FUBP3Q96I24 572 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 FAM213AQ9BRX8 229 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 STARD5Q9NSY2 213 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 CALCOCO1Q9P1Z2 691 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 SIX4Q9UIU6 781 aa12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.49□□□□□ -0.41
CACNA1C-228ENST00000492150 LEFTY2O00292 366 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 ADAM23O75077 832 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 ATP2C2O75185 946 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 CYP17A1P05093 508 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 MYF5P13349 255 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 PCSK1P29120 753 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 DDIT3P35638 169 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 LHX1P48742 406 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 USP46P62068 366 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 SOWAHAQ2M3V2 549 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 HLA-BQ31612 363 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 EMC10Q5UCC4 262 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 LIMS2Q7Z4I7 341 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 ADGRF2Q8IZF7 708 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 ADGRG2Q8IZP9 1017 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 CSGALNACT2Q8N6G5 542 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 TOP6BLQ8N6T0 577 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 HVCN1Q96D96 273 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 SAAL1Q96ER3 474 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 HIC2Q96JB3 615 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 SPATA17Q96L03 361 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 SNX9Q9Y5X1 595 aa12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 TLN1Q9Y490 2541 aaKnown RBP12.48□□□□□ -0.41
CACNA1C-228ENST00000492150 A0A0A0MRY4 1105 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 PCDHGA12O60330 932 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 KRT10P13645 584 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 GABRG2P18507 467 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 LMO2P25791 158 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 LONP1P36776 959 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 KIR2DL1P43626 348 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 SLC7A9P82251 487 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 BNC1Q01954 994 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 DHCR24Q15392 516 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 DYMQ7RTS9 669 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 FILIP1Q7Z7B0 1213 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 KRI1Q8N9T8 703 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 CACTINQ8WUQ7 758 aaKnown RBP12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 KBTBD7Q8WVZ9 684 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 TSC1Q92574 1164 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 ZNF578Q96N58 590 aaPredicted RBP12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 PNKPQ96T60 521 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 RNF38Q9H0F5 515 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 CRTAC1Q9NQ79 661 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 TRPM5Q9NZQ8 1165 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 GMIPQ9P107 970 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 ITGA11Q9UKX5 1188 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 KIF3AQ9Y496 699 aa12.47□□□□□ -0.41
CACNA1C-228ENST00000492150 GOLGA8IPA6NC78 632 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 ZNF840PA6NDX5 716 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 MYMKA6NI61 221 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 GOLGA8JA6NMD2 632 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 K7ENP7 123 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 SCAMP3O14828 347 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 KAT7O95251 611 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 PFKLP17858 780 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 BDNFP23560 247 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 TIE1P35590 1138 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 EIF2DP41214 584 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 PDE6CP51160 858 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 PSMC1P62191 440 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 RBP5P82980 135 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 CCDC157Q569K6 752 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 L1TD1Q5T7N2 865 aaKnown RBP12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 INO80CQ6PI98 192 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 RHBDF2Q6PJF5 856 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 VSTM1Q6UX27 236 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 C4orf50Q6ZRC1 276 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 DENND5BQ6ZUT9 1274 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 USP49Q70CQ1 688 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 C12orf40Q86WS4 652 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 KIAA1958Q8N8K9 716 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 RASSF8Q8NHQ8 419 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 MYLPFQ96A32 169 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 ACCSQ96QU6 501 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 SYT15Q9BQS2 421 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 TTLL2Q9BWV7 592 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 DPH1Q9BZG8 443 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 PDE11AQ9HCR9 933 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 ZDHHC4Q9NPG8 344 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 RBAKQ9NYW8 714 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 MAGEC2Q9UBF1 373 aaPredicted RBP12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 FTSJ1Q9UET6 329 aa12.46□□□□□ -0.41
CACNA1C-228ENST00000492150 H3BQV1 296 aa12.45□□□□□ -0.42
CACNA1C-228ENST00000492150 PAPSS1O43252 624 aaPredicted RBP12.45□□□□□ -0.42
CACNA1C-228ENST00000492150 RFPL3O75679 317 aa12.45□□□□□ -0.42
CACNA1C-228ENST00000492150 OLFM2O95897 454 aa12.45□□□□□ -0.42
CACNA1C-228ENST00000492150 LDHAP00338 332 aaKnown RBP12.45□□□□□ -0.42
CACNA1C-228ENST00000492150 KRT19P08727 400 aa12.45□□□□□ -0.42
CACNA1C-228ENST00000492150 GARTP22102 1010 aa12.45□□□□□ -0.42
CACNA1C-228ENST00000492150 GJB2P29033 226 aa12.45□□□□□ -0.42
CACNA1C-228ENST00000492150 GRIK1P39086 918 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms