RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 TTC30AQ86WT1 665 aa28.52■■■□□ 2.16
SH3GL3-204ENST00000492099 ARHGAP18Q8N392 663 aa28.52■■■□□ 2.16
SH3GL3-204ENST00000492099 PNKPQ96T60 521 aa28.52■■■□□ 2.16
SH3GL3-204ENST00000492099 LSM7Q9UK45 103 aaKnown RBP28.52■■■□□ 2.16
SH3GL3-204ENST00000492099 PALM2-AKAP2B1ALY0 433 aaPredicted RBP28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 XPO1O14980 1071 aaKnown RBP28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 AFPP02771 609 aaKnown RBP28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 BST2Q10589 180 aaKnown RBP28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 BTBD8Q5XKL5 378 aa28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 TMEM270Q6UE05 265 aa28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 EHBP1Q8NDI1 1231 aa28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 SPHK2Q9NRA0 654 aa28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 PCDHB4Q9Y5E5 795 aa28.51■■■□□ 2.15
SH3GL3-204ENST00000492099 GPR179Q6PRD1 2367 aa28.5■■■□□ 2.15
SH3GL3-204ENST00000492099 K7EQS6 105 aa28.5■■■□□ 2.15
SH3GL3-204ENST00000492099 HRO43593 1189 aa28.5■■■□□ 2.15
SH3GL3-204ENST00000492099 PDE4CQ08493 712 aa28.5■■■□□ 2.15
SH3GL3-204ENST00000492099 MLKLQ8NB16 471 aa28.5■■■□□ 2.15
SH3GL3-204ENST00000492099 WBP2Q969T9 261 aa28.5■■■□□ 2.15
SH3GL3-204ENST00000492099 NUDT5Q9UKK9 219 aa28.5■■■□□ 2.15
SH3GL3-204ENST00000492099 MYO16Q9Y6X6 1858 aa28.5■■■□□ 2.15
SH3GL3-204ENST00000492099 HOXC11O43248 304 aaPredicted RBP28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 GREM1O60565 184 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 APODP05090 189 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 SLC6A11P48066 632 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 TKTL1P51854 596 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 GCNT1Q02742 428 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 SIM2Q14190 667 aaPredicted RBP28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 PREPLQ4J6C6 727 aaPredicted RBP28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 DCLK2Q8N568 766 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 USP33Q8TEY7 942 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 CLSTN2Q9H4D0 955 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 GMEB2Q9UKD1 530 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 WDR87Q6ZQQ6 2873 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 ZNF292O60281 2723 aa28.49■■■□□ 2.15
SH3GL3-204ENST00000492099 A0A0A0MRY4 1105 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 O00370 1275 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 KAT7O95251 611 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 ZBED1O96006 694 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 GRIA2P42262 883 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 PM20D1Q6GTS8 502 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 LAIR1Q6GTX8 287 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 LCLAT1Q6UWP7 414 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 PRR23BQ6ZRT6 265 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 C12orf40Q86WS4 652 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 GPR161Q8N6U8 529 aaKnown RBP28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 LRRC4Q9HBW1 653 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 ARHGEF4Q9NR80 690 aa28.48■■■□□ 2.15
SH3GL3-204ENST00000492099 MDM4O15151 490 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 SETSIPP0DME0 302 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 HOXC13P31276 330 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 SEC13P55735 322 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 YWHAGP61981 247 aaKnown RBP eCLIP28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 MRPS21P82921 87 aaKnown RBP28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 COG7P83436 770 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 DMC1Q14565 340 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 STILQ15468 1287 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 ANO4Q32M45 955 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 RRAGAQ7L523 313 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 TMEM25Q86YD3 366 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 KIAA2013Q8IYS2 634 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 KAT5Q92993 513 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 ATG2BQ96BY7 2078 aa28.47■■■□□ 2.15
SH3GL3-204ENST00000492099 TULP2O00295 520 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 CNGA2Q16280 664 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 C2orf27AQ580R0 203 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 CLEC17AQ6ZS10 378 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 MIB1Q86YT6 1006 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 ARHGEF19Q8IW93 802 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 ETFBKMTQ8IXQ9 262 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 UBA3Q8TBC4 463 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 KCTD13Q8WZ19 329 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 ULBP1Q9BZM6 244 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 INTS2Q9H0H0 1204 aaKnown RBP28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 POLR3BQ9NW08 1133 aaPredicted RBP28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 ZNF510Q9Y2H8 683 aa28.46■■■□□ 2.15
SH3GL3-204ENST00000492099 TNFRSF4P43489 277 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 PXNP49023 591 aaPredicted RBP28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 SRSF5Q13243 272 aaKnown RBP28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 LPAL2Q16609 132 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 HSF5Q4G112 596 aaPredicted RBP28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 PKDCCQ504Y2 493 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 NUDT18Q6ZVK8 323 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 CEP68Q76N32 757 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 RSRC2Q7L4I2 434 aaKnown RBP28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 CREBRFQ8IUR6 639 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 RBBP8NLQ8NC74 664 aaPredicted RBP28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 TFAP2BQ92481 460 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 CNOT6LQ96LI5 555 aaKnown RBP28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 IPO9Q96P70 1041 aaKnown RBP28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 HHIPQ96QV1 700 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 WDR35Q9P2L0 1181 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 DEC1Q9P2X7 70 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 RASAL2Q9UJF2 1139 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 STRIP2Q9ULQ0 834 aa28.45■■■□□ 2.14
SH3GL3-204ENST00000492099 RNF225M0QZC1 329 aaPredicted RBP28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 STC2O76061 302 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 APBB3O95704 486 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 EFEMP1Q12805 493 aa28.44■■■□□ 2.14
SH3GL3-204ENST00000492099 Q6ZNB5 142 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms