RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 CHORDC1Q9UHD1 332 aaPredicted RBP9.24□□□□□ -0.93
NUP50-217ENST00000491860 FRYQ5TBA9 3013 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 MYO18AQ92614 2054 aaKnown RBP9.24□□□□□ -0.93
NUP50-217ENST00000491860 MYOFQ9NZM1 2061 aa9.24□□□□□ -0.93
NUP50-217ENST00000491860 CNOT1A5YKK6 2376 aaKnown RBP9.23□□□□□ -0.93
NUP50-217ENST00000491860 NUP205Q92621 2012 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 TBC1D3BA6NDS4 549 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 SLC16A3O15427 465 aaKnown RBP9.23□□□□□ -0.93
NUP50-217ENST00000491860 GDF9O60383 454 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 CILPO75339 1184 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 PROS1P07225 676 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 CCDC130P13994 396 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 GCLMP48507 274 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 MXI1P50539 228 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 SEC13P55735 322 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 NUCB2P80303 420 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 COG7P83436 770 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 STIM1Q13586 685 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 GAB4Q2WGN9 574 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 LY6G5CQ5SRR4 150 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 N4BP2L1Q5TBK1 243 aaPredicted RBP9.23□□□□□ -0.93
NUP50-217ENST00000491860 PMS2CLQ68D20 193 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 GRAMD4Q6IC98 578 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 SLC36A4Q6YBV0 504 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 CLEC20AQ6ZU45 233 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 RABEPKQ7Z6M1 372 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 DUSP16Q9BY84 665 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 DUSP15Q9H1R2 295 aaPredicted RBP9.23□□□□□ -0.93
NUP50-217ENST00000491860 CCSER2Q9H7U1 834 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 FAM49BQ9NUQ9 324 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 RAB20Q9NX57 234 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 CLIC5Q9NZA1 410 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 MARK1Q9P0L2 795 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 DNMT3LQ9UJW3 386 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 STARD13Q9Y3M8 1113 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 CACNA1GO43497 2377 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 PLXND1Q9Y4D7 1925 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 THADAQ6YHU6 1953 aa9.23□□□□□ -0.93
NUP50-217ENST00000491860 ZZEF1O43149 2961 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 SPEGQ15772 3267 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 BCLAF3A2AJT9 711 aaKnown RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 KHNYNO15037 678 aaKnown RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 NPC1O15118 1278 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ZNF217O75362 1048 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 TULP3O75386 442 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 KLF8O95600 359 aaPredicted RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 CAVIN2O95810 425 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ACO1P21399 889 aaKnown RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 ADORA2BP29275 332 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 HOXD12P35452 270 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 TIE1P35590 1138 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 CHKAP35790 457 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 KIR2DL1P43626 348 aaPredicted RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 KIF11P52732 1056 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ZNF132P52740 706 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 FKBP3Q00688 224 aaKnown RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 CREB5Q02930 508 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 LRRC63Q05C16 580 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ANO4Q32M45 955 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ZCWPW2Q504Y3 356 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 C1orf220Q5T0J3 134 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ZNF658Q5TYW1 1059 aaPredicted RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 DAB2IPQ5VWQ8 1189 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 RNF43Q68DV7 783 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 NAIF1Q69YI7 327 aaPredicted RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 SPOPLQ6IQ16 392 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ANO7Q6IWH7 933 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 LPCAT2Q7L5N7 544 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 CYP2U1Q7Z449 544 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 BBS7Q8IWZ6 715 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ETFBKMTQ8IXQ9 262 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ZNF513Q8N8E2 541 aaPredicted RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 C12orf29Q8N999 325 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 TERB1Q8NA31 727 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 IL17RCQ8NAC3 791 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 TXNDC5Q8NBS9 432 aaKnown RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 ZMIZ2Q8NF64 920 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 MDGA1Q8NFP4 955 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 TAS1R2Q8TE23 839 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 HEXIM2Q96MH2 286 aaKnown RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 KLF16Q9BXK1 252 aaPredicted RBP9.22□□□□□ -0.93
NUP50-217ENST00000491860 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
NUP50-217ENST00000491860 BCCIPQ9P287 314 aaKnown RBP eCLIP9.22□□□□□ -0.93
NUP50-217ENST00000491860 NAGPAQ9UK23 515 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 KIAA1257Q9ULG3 409 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 STRIP2Q9ULQ0 834 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ZDHHC9Q9Y397 364 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ATRXP46100 2492 aa9.22□□□□□ -0.93
NUP50-217ENST00000491860 ASPMQ8IZT6 3477 aa9.21□□□□□ -0.93
NUP50-217ENST00000491860 HHLA1C9JL84 531 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 GFRA2O00451 464 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 MAP3K13O43283 966 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 CACNG3O60359 315 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 BEST1O76090 585 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 PRR29P0C7W0 189 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 TRIM49P0CI25 452 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 TRIM49CP0CI26 452 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 RARGP13631 454 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 CD58P19256 250 aa9.21□□□□□ -0.94
NUP50-217ENST00000491860 TBXAS1P24557 533 aaPredicted RBP9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms