RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 INCA1Q0VD86 236 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 KCNH2Q12809 1159 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 TEAD2Q15562 447 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 KDM7AQ6ZMT4 941 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 TMEM150AQ86TG1 271 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 IQCKQ8N0W5 287 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 MREGQ8N565 214 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 SYN2Q92777 582 aaPredicted RBP9.9□□□□□ -0.82
BRCA1-219ENST00000491747 FUBP3Q96I24 572 aaKnown RBP eCLIP9.9□□□□□ -0.82
BRCA1-219ENST00000491747 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 ASAH2Q9NR71 780 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 SMARCAL1Q9NZC9 954 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 EHD2Q9NZN4 543 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 SALL4Q9UJQ4 1053 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 ASB3Q9Y575 518 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 PATJQ8NI35 1801 aa9.9□□□□□ -0.82
BRCA1-219ENST00000491747 FAM86C2PA6NEL3 165 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 BUB1O43683 1085 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 HEXIM1O94992 359 aaKnown RBP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 GNA14O95837 355 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 SERPING1P05155 500 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 P4HA1P13674 534 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 MAGEA11P43364 429 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 ZXDAP98168 799 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 PDCLQ13371 301 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 HTR4Q13639 388 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 CYP4A22Q5TCH4 519 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 EMC10Q5UCC4 262 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 TTC19Q6DKK2 380 aaPredicted RBP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 C4orf50Q6ZRC1 276 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 SCN4BQ8IWT1 228 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 CRYBG2Q8N1P7 616 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 C12orf29Q8N999 325 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 C1orf131Q8NDD1 294 aaKnown RBP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 IMPG2Q9BZV3 1241 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 ELOVL4Q9GZR5 314 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 EPB41L5Q9HCM4 733 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 NFU1Q9UMS0 254 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 SLC38A8A6NNN8 435 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 ZNF197O14709 1029 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 PMM2O15305 246 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 NARSO43776 548 aaKnown RBP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 CILPO75339 1184 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 GLI1P08151 1106 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 CCDC130P13994 396 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 GABRR2P28476 465 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 CARSP49589 748 aaKnown RBP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 GUCY2DQ02846 1103 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 MAPRE1Q15691 268 aaKnown RBP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 SFMBT2Q5VUG0 894 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 HGSNATQ68CP4 663 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 SLC44A3Q8N4M1 653 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 OTUD6BQ8N6M0 293 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 EDAQ92838 391 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 PLA2G2FQ9BZM2 168 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 RABEP2Q9H5N1 569 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 CYP3A43Q9HB55 503 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 SORCS3Q9UPU3 1222 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.89□□□□□ -0.83
BRCA1-219ENST00000491747 NUMBLQ9Y6R0 609 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 NCANO14594 1321 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 COL4A3Q01955 1670 aa9.89□□□□□ -0.83
BRCA1-219ENST00000491747 HMGB1P1B2RPK0 211 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-219ENST00000491747 BEST1O76090 585 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 MICAL2O94851 1124 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 F11P03951 625 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 ALADP13716 330 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 NR1D1P20393 614 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 FCARP24071 287 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 LSP1P33241 339 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 GRIK1P39086 918 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 USP46P62068 366 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 RPL10AP62906 217 aaKnown RBP9.88□□□□□ -0.83
BRCA1-219ENST00000491747 CYP4F8P98187 520 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 VEPH1Q14D04 833 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 ZNF394Q53GI3 561 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 WDR44Q5JSH3 913 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 KCTD16Q68DU8 428 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 ITIH5Q86UX2 942 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 UNC93AQ86WB7 457 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 GPIHBP1Q8IV16 184 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 FUKQ8N0W3 1084 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 IFT81Q8WYA0 676 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 KAT5Q92993 513 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 MS4A14Q96JA4 679 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 KCNK16Q96T55 309 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 EPN3Q9H201 632 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 CISHQ9NSE2 258 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 FAM49BQ9NUQ9 324 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 MAGED2Q9UNF1 606 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-219ENST00000491747 ZFP37Q9Y6Q3 630 aaPredicted RBP9.88□□□□□ -0.83
BRCA1-219ENST00000491747 TECTAO75443 2155 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 GOLGA6L10A6NI86 522 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 F8VP50 259 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 H0YHG0 523 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 PALMO75781 387 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 NOL4O94818 638 aa9.88□□□□□ -0.83
BRCA1-219ENST00000491747 AFPP02771 609 aaKnown RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms