RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 FKBP15Q5T1M5 1219 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 LRCH2Q5VUJ6 765 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 ARHGEF16Q5VV41 709 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 TTI2Q6NXR4 508 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 TMC3Q7Z5M5 1100 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 PLEKHH3Q7Z736 793 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 CCDC60Q8IWA6 550 aaPredicted RBP4.87□□□□□ -1.63
CLIP4-211ENST00000491701 CHCHD4Q8N4Q1 142 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 FIBCD1Q8N539 461 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 LINC01465Q8N7H1 131 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 ZNF610Q8N9Z0 462 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 IQUBQ8NA54 791 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 ZNF527Q8NB42 609 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 PIGOQ8TEQ8 1089 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 TRAPPC12Q8WVT3 735 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 MISP3Q96FF7 219 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 BORCS6Q96GS4 357 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 TMEM41AQ96HV5 264 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 MAML3Q96JK9 1138 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 MMP19Q99542 508 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 GPR20Q99678 358 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 SH2D3AQ9BRG2 576 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 ZNF577Q9BSK1 485 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 LRFN3Q9BTN0 628 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 TTLL2Q9BWV7 592 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 AP1M1Q9BXS5 423 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 TRIT1Q9H3H1 467 aaKnown RBP4.87□□□□□ -1.63
CLIP4-211ENST00000491701 PLEKHA5Q9HAU0 1116 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 TUFT1Q9NNX1 390 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 PAK6Q9NQU5 681 aaPredicted RBP4.87□□□□□ -1.63
CLIP4-211ENST00000491701 STARD7Q9NQZ5 370 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 SAMSN1Q9NSI8 373 aaKnown RBP4.87□□□□□ -1.63
CLIP4-211ENST00000491701 PADI4Q9UM07 663 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 PCDHB12Q9Y5F1 795 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 SPO11Q9Y5K1 396 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 SNX11Q9Y5W9 270 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 GPR45Q9Y5Y3 372 aa4.87□□□□□ -1.63
CLIP4-211ENST00000491701 IGKV6-21A0A0C4DH24 114 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 PVALEFA0A1B0GWK0 134 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 SHISA3A0PJX4 238 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 DDX39AO00148 427 aaKnown RBP4.86□□□□□ -1.63
CLIP4-211ENST00000491701 WNT9AO14904 365 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 TGFB1I1O43294 461 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 STRNO43815 780 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 PLOD3O60568 738 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 KINO60870 393 aaKnown RBP4.86□□□□□ -1.63
CLIP4-211ENST00000491701 NDUFS2O75306 463 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 SUPT20HL2P0C7V6 817 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 ATP1A3P13637 1013 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 MUTP22033 750 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 HTR1BP28222 390 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 CCND2P30279 289 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 HOXD12P35452 270 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 KRT9P35527 623 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 CCT6AP40227 531 aaKnown RBP4.86□□□□□ -1.63
CLIP4-211ENST00000491701 PBX1P40424 430 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 UBA7P41226 1012 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 MTNR1BP49286 362 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 RARRES1P49788 294 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 ARL4CP56559 192 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 SOX10P56693 466 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 INHBEP58166 350 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 ADAM17P78536 824 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 CYP4A11Q02928 519 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 DRP2Q13474 957 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 ZNF124Q15973 351 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 PGS1Q32NB8 556 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 UAP1L1Q3KQV9 507 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 HSDL1Q3SXM5 330 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 HSF5Q4G112 596 aaPredicted RBP4.86□□□□□ -1.63
CLIP4-211ENST00000491701 FBLN7Q53RD9 439 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 CELF3Q5SZQ8 465 aaKnown RBP4.86□□□□□ -1.63
CLIP4-211ENST00000491701 ANKRD40Q6AI12 368 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 ITPRIPL1Q6GPH6 555 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 NCAPH2Q6IBW4 605 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 CENPPQ6IPU0 288 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 SEPT14Q6ZU15 432 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 FRMD7Q6ZUT3 714 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 C16orf59Q7L2K0 433 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 ARMCX2Q7L311 632 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 C4orf19Q8IY42 314 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 ANKRD35Q8N283 1001 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 LSMEM1Q8N8F7 131 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 PIWIL2Q8TC59 973 aaKnown RBP4.86□□□□□ -1.63
CLIP4-211ENST00000491701 SCFD1Q8WVM8 642 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 KAT2BQ92831 832 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 KCNN1Q92952 543 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 FBXW5Q969U6 566 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 VWCEQ96DN2 955 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 RSRC1Q96IZ7 334 aaKnown RBP4.86□□□□□ -1.63
CLIP4-211ENST00000491701 GSDMAQ96QA5 445 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 NUDT16L1Q9BRJ7 211 aaKnown RBP4.86□□□□□ -1.63
CLIP4-211ENST00000491701 SDF4Q9BRK5 362 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 C16orf70Q9BSU1 422 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 TMEM120AQ9BXJ8 343 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 HAPLN2Q9GZV7 340 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 PRDM14Q9GZV8 571 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 KCTD10Q9H3F6 313 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 MS4A5Q9H3V2 200 aa4.86□□□□□ -1.63
CLIP4-211ENST00000491701 CARS2Q9HA77 564 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms