RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 COL4A3Q01955 1670 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 STK25O00506 426 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MDM4O15151 490 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 GFPT2O94808 682 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 GLULP15104 373 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 STAT1P42224 750 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 KPNA1P52294 538 aaPredicted RBP17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 FANCCQ00597 558 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TNK2Q07912 1038 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PDCLQ13371 301 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 BTBD8Q5XKL5 378 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MSANTD3Q96H12 275 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 DDX23Q9BUQ8 820 aaKnown RBP17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 KLF16Q9BXK1 252 aaPredicted RBP17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SLC4A5Q9BY07 1137 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 EBF3Q9H4W6 596 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 C8orf33Q9H7E9 229 aaPredicted RBP17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 HPS4Q9NQG7 708 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 GTSE1Q9NYZ3 720 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 WNT6Q9Y6F9 365 aa17.08■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 A0A1W2PQC6 194 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 E2F8A0AVK6 867 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 YJEFN3A6XGL0 299 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 E7ENQ6 273 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 IRF1P10914 325 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ARSAP15289 507 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MLLT6P55198 1093 aaPredicted RBP17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 GOLGA8FQ08AF8 430 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 GOLGA8DPQ0D2H9 430 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 RUNX3Q13761 415 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NR1I3Q14994 352 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ITPRIPL2Q3MIP1 535 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TAF3Q5VWG9 929 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 BSPRYQ5W0U4 402 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ASTLQ6HA08 431 aaPredicted RBP17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ZNF852Q6ZMS4 543 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 RSRC2Q7L4I2 434 aaKnown RBP17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CACNA2D4Q7Z3S7 1137 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NOP9Q86U38 636 aaKnown RBP17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 C1orf131Q8NDD1 294 aaKnown RBP17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TTC8Q8TAM2 541 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 EPS8L1Q8TE68 723 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CLEC4CQ8WTT0 213 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 GOLGA1Q92805 767 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ATP2A3Q93084 1043 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NOX5Q96PH1 765 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MIS12Q9H081 205 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PDCL3Q9H2J4 239 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 OLA1Q9NTK5 396 aaKnown RBP17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 RASAL2Q9UJF2 1139 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SH3BP1Q9Y3L3 701 aa17.07■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 KANSL1LA0AUZ9 987 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 E5RJQ4 531 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MAN2B1O00754 1011 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SLC9A3R1O14745 358 aaPredicted RBP17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SART1O43290 800 aaKnown RBP17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 LTFP02788 710 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 AOC1P19801 751 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SOX9P48436 509 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CLCN5P51795 746 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 UBASH3AP57075 661 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 EFEMP1Q12805 493 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 EML3Q32P44 896 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TMEM110Q86TL2 294 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CPA6Q8N4T0 437 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 WDTC1Q8N5D0 677 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 DDX1Q92499 740 aaKnown RBP17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 FOXQ1Q9C009 403 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ABCC13Q9NSE7 274 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 STRIP2Q9ULQ0 834 aa17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MRPS17Q9Y2R5 130 aaKnown RBP17.06■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SHISA7A6NL88 538 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SPECC1L-ADORA2AF8WAN1 911 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SCAMP3O14828 347 aaKnown RBP17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NFATC1O95644 943 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CD72P21854 359 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CTHP32929 405 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 VCPP55072 806 aaKnown RBP17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ZNF445P59923 1031 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 UBXN2BQ14CS0 331 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 C1orf228Q6PIY5 440 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 RALGPS2Q86X27 583 aaPredicted RBP17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ZNF677Q86XU0 584 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MIB1Q86YT6 1006 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 SCUBE3Q8IX30 993 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TMEM35BQ8NCS4 154 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PJA1Q8NG27 643 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 RNF139Q8WU17 664 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 FAM3CQ92520 227 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 EDEM1Q92611 657 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 WBP2Q969T9 261 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 PPP1R13BQ96KQ4 1090 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 CPXM1Q96SM3 734 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 LINC00597Q9H2U6 94 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 ECT2Q9H8V3 914 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 LTB4R2Q9NPC1 389 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 MARCH2Q9P0N8 246 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 TBC1D14Q9P2M4 693 aa17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 NOCTQ9UK39 431 aaKnown RBP17.05■□□□□ 0.32
MSH5-SAPCD1-206ENST00000491552 LSM7Q9UK45 103 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms