RNA–Protein interactions for RNA: ENST00000491334.1

CDK5RAP2-218, Transcript of CDK5 regulatory subunit associated protein 2, human

TSL 2

Gene CDK5RAP2, Length 546 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP2-218	ENST00000491334	SLC6A17	Q9H1V8	727 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	IL21R	Q9HBE5	538 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TOR4A	Q9NXH8	423 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	WSB2	Q9NYS7	404 aa	Predicted RBP	20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	WDR35	Q9P2L0	1181 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	MAST4	O15021	2626 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	KNL1	Q8NG31	2342 aa		20.44	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	BCAT2	O15382	392 aa	Predicted RBP	20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	NCAM1	P13591	858 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PTPN1	P18031	435 aa	Known RBP	20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	LONP1	P36776	959 aa	Known RBP	20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ABCG1	P45844	678 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	SURF1	Q15526	300 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	HLA-B	Q31612	363 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	SNX30	Q5VWJ9	437 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ZCCHC9	Q8N567	271 aa	Known RBP	20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	OR6B3	Q8NGW1	331 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	BAHD1	Q8TBE0	780 aa	Predicted RBP	20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	GPR174	Q9BXC1	333 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	NACA2	Q9H009	215 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CD93	Q9NPY3	652 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ITM2C	Q9NQX7	267 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	RAD54B	Q9Y620	910 aa		20.43	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	GOLGA8CP	A6NN73	597 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	NEDD8-MDP1	E9PL57	170 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CACNG3	O60359	315 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	GCNT3	O95395	438 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PRB1	P04280	392 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	GAP43	P17677	238 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TUB	P50607	506 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CAMK2B	Q13554	666 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CRELD1	Q96HD1	420 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	BBS2	Q9BXC9	721 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PCIF1	Q9H4Z3	704 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	FNDC3A	Q9Y2H6	1198 aa	Known RBP	20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CABIN1	Q9Y6J0	2220 aa		20.42	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	METTL12	A8MUP2	240 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PRRT4	C9JH25	899 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334		E9PAM4	449 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TACC1	O75410	805 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	PRPF6	O94906	941 aa	Known RBP	20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TYR	P14679	529 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	OXTR	P30559	389 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CACNA2D1	P54289	1103 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	STARD3	Q14849	445 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	HTR3D	Q70Z44	454 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	MARCH9	Q86YJ5	346 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	GPD1L	Q8N335	351 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	OR5B17	Q8NGF7	314 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	MRPL45	Q9BRJ2	306 aa	Known RBP	20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CBWD1	Q9BRT8	395 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ZNF518B	Q9C0D4	1074 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	CCSER2	Q9H7U1	834 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TBC1D7	Q9P0N9	293 aa		20.41	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ZNF233	A6NK53	670 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	WASH3P	C4AMC7	463 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	KIAA0391	O15091	583 aa	Known RBP	20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	TNFSF14	O43557	240 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	IRF1	P10914	325 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ZNF132	P52740	706 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	DCAF12L1	Q5VU92	463 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	LSM14A	Q8ND56	463 aa	Known RBP	20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ENGASE	Q8NFI3	743 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	DCBLD2	Q96PD2	775 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	20.4	■□□□□ 0.86	3e-10	■■■■■ 130.4
CDK5RAP2-218	ENST00000491334	TMEM30A	Q9NV96	361 aa		20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	USP36	Q9P275	1121 aa	Known RBP	20.4	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	SHROOM3	Q8TF72	1996 aa		20.39	■□□□□ 0.86
CDK5RAP2-218	ENST00000491334	ATXN7	O15265	892 aa	Predicted RBP	20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	BMP15	O95972	392 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	DGKG	P49619	791 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	ALCAM	Q13740	583 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	SMAD1	Q15797	465 aa	Known RBP	20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	TPGS1	Q6ZTW0	290 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	ZNF605	Q86T29	641 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	PIP4K2C	Q8TBX8	421 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	WBP2	Q969T9	261 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	NUP58	Q9BVL2	599 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	B3GNT5	Q9BYG0	378 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	COMMD8	Q9NX08	183 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	MARK1	Q9P0L2	795 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	EIF2B4	Q9UI10	523 aa	Known RBP	20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	STON1	Q9Y6Q2	735 aa		20.39	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	FAM149A	A5PLN7	773 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334		H3BQV1	296 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	CLDN5	O00501	218 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	NPC1	O15118	1278 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	HLA-E	P13747	358 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	BNC1	Q01954	994 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	FUT11	Q495W5	492 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	SCAMP5	Q8TAC9	235 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	KCNK16	Q96T55	309 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	OLFML3	Q9NRN5	406 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	IL37	Q9NZH6	218 aa		20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	20.38	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	ATP8B3	O60423	1300 aa		20.37	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	PTPRJ	Q12913	1337 aa		20.37	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334		A8MXQ7	604 aa		20.37	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	CISD3	P0C7P0	127 aa		20.37	■□□□□ 0.85
CDK5RAP2-218	ENST00000491334	ZDHHC11B	P0C7U3	371 aa		20.37	■□□□□ 0.85

Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms