RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PCDHGA5Q9Y5G8 931 aa17.43■□□□□ 0.38
PDLIM2-217ENST00000491330 A0A1W2PQH9 124 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 CYP26A1O43174 497 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 HOXC11O43248 304 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 CYBBP04839 570 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 VDRP11473 427 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 GBP1P32455 592 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 OPRD1P41143 372 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 PXNP49023 591 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 BCAT1P54687 386 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 ZXDBP98169 803 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 DMWDQ09019 674 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 STILQ15468 1287 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 RSPO4Q2I0M5 234 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 SIX6OS1Q8N1H7 587 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 PGBD3Q8N328 593 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 ZNF276Q8N554 614 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 FAM160A2Q8N612 972 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 RNF139Q8WU17 664 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 NELFBQ8WX92 580 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 SEMA4DQ92854 862 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 SPACA7Q96KW9 195 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 BBS2Q9BXC9 721 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 KLF16Q9BXK1 252 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 SEMA4GQ9NTN9 838 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 MAN1B1Q9UKM7 699 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 MMP17Q9ULZ9 603 aa17.42■□□□□ 0.38
PDLIM2-217ENST00000491330 COL4A2P08572 1712 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 SCAMP3O14828 347 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 MAP3K13O43283 966 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 PRKCSHP14314 528 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 FMO5P49326 533 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 RAD23BP54727 409 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 BST2Q10589 180 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 PAK1Q13153 545 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 GRAMD4Q6IC98 578 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 MIB1Q86YT6 1006 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 BBS7Q8IWZ6 715 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 NETO1Q8TDF5 533 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 WHAMMQ8TF30 809 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 DDX1Q92499 740 aaKnown RBP17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 ERCC4Q92889 916 aaPredicted RBP17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 TATDN2Q93075 761 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 SLC35C1Q96A29 364 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 RMDN1Q96DB5 314 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 FAM81BQ96LP2 452 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 RTKNQ9BST9 563 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 PATJQ8NI35 1801 aa17.41■□□□□ 0.38
PDLIM2-217ENST00000491330 A0A0A0MRY4 1105 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 NEDD8-MDP1E9PL57 170 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 K7EQS6 105 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 PMM2O15305 246 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 ZBED1O96006 694 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 PAEPP09466 180 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 SETSIPP0DME0 302 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 TIE1P35590 1138 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 KDSRQ06136 332 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 LRMPQ12912 555 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 SRSF5Q13243 272 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 MORC3Q14149 939 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 CRY1Q16526 586 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 AASDHQ4L235 1098 aaPredicted RBP17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 CBWD6Q4V339 395 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 CBWD3Q5JTY5 395 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 CBWD5Q5RIA9 395 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 C10orf76Q5T2E6 689 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 PKN3Q6P5Z2 889 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 PPM1KQ8N3J5 372 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 CCDC33Q8N5R6 958 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 NAT16Q8N8M0 369 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 SLC4A11Q8NBS3 891 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 GBP4Q96PP9 640 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 DNAJC17Q9NVM6 304 aaKnown RBP17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 RASAL2Q9UJF2 1139 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 PCDHB4Q9Y5E5 795 aa17.4■□□□□ 0.38
PDLIM2-217ENST00000491330 GREB1Q4ZG55 1949 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 ZNF638Q14966 1978 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TRIM49BA6NDI0 452 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 HHLA1C9JL84 531 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 BIN1O00499 593 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 XPO1O14980 1071 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 GADD45BO75293 160 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TULP3O75386 442 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 KLF8O95600 359 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TBX18O95935 607 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 DPP6P42658 865 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 SLC6A11P48066 632 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 HARS2P49590 506 aaKnown RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TKTL1P51854 596 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 YWHAGP61981 247 aaKnown RBP eCLIP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TPD52L1Q16890 204 aaPredicted RBP17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 GOLGA7BQ2TAP0 167 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 IL31Q6EBC2 164 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 ANO7Q6IWH7 933 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 PRR23CQ6ZRP0 262 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 TPGS1Q6ZTW0 290 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 GPRIN1Q7Z2K8 1008 aa17.39■□□□□ 0.37
PDLIM2-217ENST00000491330 PIGZQ86VD9 579 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms