RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 CDCA5Q96FF9 252 aa10.56□□□□□ -0.72
BRD9-209ENST00000490814 TTC25Q96NG3 672 aa10.56□□□□□ -0.72
BRD9-209ENST00000490814 TUBB6Q9BUF5 446 aa10.56□□□□□ -0.72
BRD9-209ENST00000490814 VPS33BQ9H267 617 aa10.56□□□□□ -0.72
BRD9-209ENST00000490814 STX18Q9P2W9 335 aaKnown RBP10.56□□□□□ -0.72
BRD9-209ENST00000490814 CCDC195A0A1B0GUA6 201 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 HNRNPCL1O60812 293 aaKnown RBP10.55□□□□□ -0.72
BRD9-209ENST00000490814 SERPINB7O75635 380 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 MAP3K6O95382 1288 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 KRT19P08727 400 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 NOMO3P69849 1222 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 TCEAL1Q15170 157 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 SUPT20HL1Q3ZLR7 823 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 TMEM214Q6NUQ4 689 aaKnown RBP10.55□□□□□ -0.72
BRD9-209ENST00000490814 B3GNT9Q6UX72 402 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 MON1BQ7L1V2 547 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 KATNAL2Q8IYT4 538 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.55□□□□□ -0.72
BRD9-209ENST00000490814 CCDC110Q8TBZ0 833 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 HSPH1Q92598 858 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 CGREF1Q99674 301 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 KRT82Q9NSB4 513 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 CLIC5Q9NZA1 410 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 COQ4Q9Y3A0 265 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 PIK3R2O00459 728 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 ZNF862O60290 1169 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 CST8O60676 142 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 ASNSP08243 561 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 MYL2P10916 166 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 PSMA2P25787 234 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 PHBP35232 272 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 SERPINB8P50452 374 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 IRX4P78413 519 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 TFAMQ00059 246 aaKnown RBP10.55□□□□□ -0.72
BRD9-209ENST00000490814 PRKCEQ02156 737 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 DSG1Q02413 1049 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 SPDYE2Q495Y8 402 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 SPOCD1Q6ZMY3 1216 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 RASSF3Q86WH2 238 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 RCOR2Q8IZ40 523 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 C2orf69Q8N8R5 385 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 OR5B17Q8NGF7 314 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 HSPBAP1Q96EW2 488 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 MFSD14AQ96MC6 490 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 RILPQ96NA2 401 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 PAFAH2Q99487 392 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 CCDC68Q9H2F9 335 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 MRPL46Q9H2W6 279 aaKnown RBP10.55□□□□□ -0.72
BRD9-209ENST00000490814 APOBEC3GQ9HC16 384 aaKnown RBP10.55□□□□□ -0.72
BRD9-209ENST00000490814 PTTG2Q9NZH5 202 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 SLC17A7Q9P2U7 560 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 ZNF212Q9UDV6 495 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 MARCOQ9UEW3 520 aaPredicted RBP10.55□□□□□ -0.72
BRD9-209ENST00000490814 SSX2IPQ9Y2D8 614 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 UBIAD1Q9Y5Z9 338 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 RGPD3A6NKT7 1758 aaPredicted RBP10.55□□□□□ -0.72
BRD9-209ENST00000490814 RGPD4Q7Z3J3 1758 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 COL24A1Q17RW2 1714 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 PTPRJQ12913 1337 aa10.55□□□□□ -0.72
BRD9-209ENST00000490814 KANSL1LA0AUZ9 987 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 FCHO1O14526 889 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 PABPC4LP0CB38 370 aaKnown RBP10.54□□□□□ -0.72
BRD9-209ENST00000490814 RGS2P41220 211 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 ZNF157P51786 506 aaPredicted RBP10.54□□□□□ -0.72
BRD9-209ENST00000490814 KLF1Q13351 362 aaPredicted RBP10.54□□□□□ -0.72
BRD9-209ENST00000490814 MTMR2Q13614 643 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 NCOA4Q13772 614 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 LRP8Q14114 963 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 ANKRD22Q5VYY1 191 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 RFX6Q8HWS3 928 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 FBXO36Q8NEA4 188 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 ACTL9Q8TC94 416 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 FAM151AQ8WW52 585 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 ZNF606Q8WXB4 792 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 CFAP36Q96G28 342 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 SLITRK1Q96PX8 696 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 FAM111AQ96PZ2 611 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 PDCD2LQ9BRP1 358 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 TUT1Q9H6E5 874 aaKnown RBP10.54□□□□□ -0.72
BRD9-209ENST00000490814 SMYD3Q9H7B4 428 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 SENP1Q9P0U3 644 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 FBXO40Q9UH90 709 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 RPL26L1Q9UNX3 145 aaKnown RBP10.54□□□□□ -0.72
BRD9-209ENST00000490814 TTLL3Q9Y4R7 772 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 KAT6AQ92794 2004 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 UNCXA6NJT0 531 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 TRAFD1O14545 582 aaPredicted RBP10.54□□□□□ -0.72
BRD9-209ENST00000490814 PRPF4O43172 522 aaKnown RBP eCLIP10.54□□□□□ -0.721e-6■■■■□ 23
BRD9-209ENST00000490814 LPXNO60711 386 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 STAM2O75886 525 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 KLRC2P26717 231 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 HSD17B4P51659 736 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 ARL4CP56559 192 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 OTUD4Q01804 1114 aaKnown RBP10.54□□□□□ -0.72
BRD9-209ENST00000490814 TRPC3Q13507 836 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 SCARA3Q6AZY7 606 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 GPAT2Q6NUI2 795 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 EMC1Q8N766 993 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 FAM71DQ8N9W8 422 aa10.54□□□□□ -0.72
BRD9-209ENST00000490814 FNDC8Q8TC99 324 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms