RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 HLA-DRAP01903 254 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 FAM163BP0C2L3 166 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 CCDC130P13994 396 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 HDCP19113 662 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 ATICP31939 592 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 RPS9P46781 194 aaKnown RBP7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 GCLMP48507 274 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 FNTBP49356 437 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 PMS1P54277 932 aaKnown RBP7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 TAF10Q12962 218 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 RUNX3Q13761 415 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 ZNF77Q15935 545 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 LPAL2Q16609 132 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 ZACNQ401N2 412 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 C4orf50Q6ZRC1 276 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 FMR1NBQ8N0W7 255 aaPredicted RBP7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 C12orf29Q8N999 325 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 ZMIZ2Q8NF64 920 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 ENGASEQ8NFI3 743 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 SCAMP5Q8TAC9 235 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 SPATA18Q8TC71 538 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 TAS1R2Q8TE23 839 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 SH3RF2Q8TEC5 729 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 SEMA4DQ92854 862 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 TRMT2BQ96GJ1 504 aaKnown RBP7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 FUBP3Q96I24 572 aaKnown RBP eCLIP7.78□□□□□ -1.169e-9■■□□□ 12.1
PRPF4B-208ENST00000490653 SPATA17Q96L03 361 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 SMOQ99835 787 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 C8orf33Q9H7E9 229 aaPredicted RBP7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 CGNQ9P2M7 1197 aaKnown RBP7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 USP25Q9UHP3 1055 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 FBXO4Q9UKT5 387 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 MKL2Q9ULH7 1088 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 SMG5Q9UPR3 1016 aaKnown RBP7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 TRAF3IP3Q9Y228 551 aa7.78□□□□□ -1.16
PRPF4B-208ENST00000490653 SDK1Q7Z5N4 2213 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ZNF840PA6NDX5 716 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 K7ESF4 209 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 LEFTY2O00292 366 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 TNFRSF10BO14763 440 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 CALUO43852 315 aaPredicted RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 GADD45BO75293 160 aaPredicted RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ADRB1P08588 477 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 USP17L7P0C7H9 530 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 NR2F2P24468 414 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 GJA4P35212 333 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 AVPR1AP37288 418 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 PRCPP42785 496 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 CXCL12P48061 93 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 SLC6A11P48066 632 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 PXNP49023 591 aaPredicted RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 VAMP7P51809 220 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 NDST1P52848 882 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 MESP2Q0VG99 397 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ADAM9Q13443 819 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 CCINQ13939 588 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 MTF1Q14872 753 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 GAB4Q2WGN9 574 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ZNF699Q32M78 642 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 EML3Q32P44 896 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ITPRIPL2Q3MIP1 535 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ZCWPW2Q504Y3 356 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ZNF667Q5HYK9 610 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 HEATR6Q6AI08 1181 aaKnown RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 VSTM1Q6UX27 236 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 DENND5BQ6ZUT9 1274 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 RALGPS2Q86X27 583 aaPredicted RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 SFTPA1Q8IWL2 248 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 FUKQ8N0W3 1084 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 B3GALNT2Q8NCR0 500 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 SYAP1Q96A49 352 aaPredicted RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 C8orf48Q96LL4 319 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 MED10Q9BTT4 135 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 TTLL2Q9BWV7 592 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 SCAND2PQ9GZW5 306 aaPredicted RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ECT2Q9H8V3 914 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 VRTNQ9H8Y1 702 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 THG1LQ9NWX6 298 aaKnown RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 ZSCAN32Q9NX65 697 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 DUS2Q9NX74 493 aaKnown RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 SMPD4Q9NXE4 827 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 TRPM5Q9NZQ8 1165 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 PCDHB11Q9Y5F2 797 aa7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.77□□□□□ -1.17
PRPF4B-208ENST00000490653 TRAV19A0A0A6YYK7 116 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 TRIM49BA6NDI0 452 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 TRDMT1O14717 391 aaKnown RBP7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 KINO60870 393 aaKnown RBP7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 CLSTN1O94985 981 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 TBX18O95935 607 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 ASS1P00966 412 aaKnown RBP7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 CKMP06732 381 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 DDX6P26196 483 aaKnown RBP eCLIP7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 COL8A1P27658 744 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 ADORA2BP29275 332 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 MAGEA9P43362 315 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 ASPAP45381 313 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 MLLT6P55198 1093 aaPredicted RBP7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 FAM160A1Q05DH4 1040 aa7.76□□□□□ -1.17
PRPF4B-208ENST00000490653 USP4Q13107 963 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms