RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 NOS2P35228 1153 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 GEMP55040 296 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 DDR2Q16832 855 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 C9orf57Q5W0N0 161 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 TPGS1Q6ZTW0 290 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 ATAD1Q8NBU5 361 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 CSGALNACT1Q8TDX6 532 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 FOPNLQ96NB1 174 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 UNC93B1Q9H1C4 597 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 NT5MQ9NPB1 228 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 Q9Y3F1 56 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 DDX42Q86XP3 938 aaKnown RBP eCLIP14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 MFSD14AQ96MC6 490 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 GTF2IRD1Q9UHL9 959 aa14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 TRPM3Q9HCF6 1732 aaPredicted RBP14.9□□□□□ -0.02
ARHGEF39-205ENST00000490638 SPOCD1Q6ZMY3 1216 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 LINC00523Q86TU6 105 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 CRLF3Q8IUI8 442 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 RAB42Q8N4Z0 105 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 SPPL2BQ8TCT7 592 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 CALML6Q8TD86 181 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 LENG9Q96B70 501 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 TKTL2Q9H0I9 626 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 SIK3Q9Y2K2 1263 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 RAD51CO43502 376 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 CYP2F1P24903 491 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 PDAP1Q13442 181 aaKnown RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 USP10Q14694 798 aaKnown RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 STAT4Q14765 748 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 E2F5Q15329 346 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 ZNF697Q5TEC3 545 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 C10orf67Q8IYJ2 551 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 WNT8BQ93098 351 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 DRC3Q9H069 523 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 XAB2Q9HCS7 855 aaKnown RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 PTPRZ1P23471 2315 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 TBC1D3BA6NDS4 549 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 CLDN5O00501 218 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 ADAMTS3O15072 1205 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 CTIFO43310 598 aaKnown RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 NCF2P19878 526 aaPredicted RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 MAP4P27816 1152 aaKnown RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 LBX1P52954 281 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 MAGOHP61326 146 aaKnown RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 KYNUQ16719 465 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 COBLL1Q53SF7 1204 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 HABP4Q5JVS0 413 aaKnown RBP14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 ZNF618Q5T7W0 954 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 C3orf62Q6ZUJ4 267 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 NUP93Q8N1F7 819 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 PDZD8Q8NEN9 1154 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 MAML1Q92585 1016 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 MBOAT7Q96N66 472 aa14.89□□□□□ -0.03
ARHGEF39-205ENST00000490638 SNAI1O95863 264 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 FGFR1P11362 822 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 MIPP30301 263 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 GEMIN4P57678 1058 aaKnown RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 FAM47EQ6ZV65 393 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 CACUL1Q86Y37 369 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 CCDC197Q8NCU1 140 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 SMAPO00193 183 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 SLC9A3R1O14745 358 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 SYF2O95926 243 aaKnown RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 AMPD1P23109 780 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 VSNL1P62760 191 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 ZC3H12AQ5D1E8 599 aaKnown RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 ZBTB41Q5SVQ8 909 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 NPAS4Q8IUM7 802 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 REXO1L1PQ8IX06 675 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 GIMAP7Q8NHV1 300 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 STK38LQ9Y2H1 464 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 AAR2Q9Y312 384 aaKnown RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 DERAQ9Y315 318 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 CASZ1Q86V15 1759 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 A0A0A6YYK5 440 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 C2orf81A6NN90 581 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 GOLGA8RI6L899 631 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 MAP3K13O43283 966 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 ESRRBO95718 433 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 CHRM3P20309 590 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 ITGA8P53708 1063 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 MTA1Q13330 715 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 IMPG1Q17R60 797 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 TOP6BLQ8N6T0 577 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 TSPAN18Q96SJ8 248 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 FOXP3Q9BZS1 431 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 ST6GALNAC4Q9H4F1 302 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 AVENQ9NQS1 362 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 MORC2Q9Y6X9 1032 aaPredicted RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 TRAV19A0A0A6YYK7 116 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 CLTBP09497 229 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 FNTAP49354 379 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 SMAD3P84022 425 aaKnown RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 MBTD1Q05BQ5 628 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 FAM71AQ8IYT1 594 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 CFAP61Q8NHU2 1237 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 GPR152Q8TDT2 470 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 DDX23Q9BUQ8 820 aaKnown RBP14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 ADAM28Q9UKQ2 775 aa14.88□□□□□ -0.03
ARHGEF39-205ENST00000490638 RPS6KL1Q9Y6S9 549 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms