RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 RIF1Q5UIP0 2472 aaKnown RBP18.35■□□□□ 0.53
SEC13-218ENST00000490283 FAM186AA6NE01 2351 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 CCDC163A0A0D9SF12 145 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 SETSIPP0DME0 302 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 PGFP49763 221 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 TKTL1P51854 596 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 SEC13P55735 322 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 PDE4CQ08493 712 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 DMWDQ09019 674 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 STILQ15468 1287 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 HTR3DQ70Z44 454 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 SYT13Q7L8C5 426 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 TTC30AQ86WT1 665 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 SIX6OS1Q8N1H7 587 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 ZNF276Q8N554 614 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 GPR161Q8N6U8 529 aaKnown RBP18.34■□□□□ 0.53
SEC13-218ENST00000490283 EHBP1Q8NDI1 1231 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 CLSTN2Q9H4D0 955 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 ARHGEF4Q9NR80 690 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 SPHK2Q9NRA0 654 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 C2orf42Q9NWW7 574 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 RASAL2Q9UJF2 1139 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 STRIP2Q9ULQ0 834 aa18.34■□□□□ 0.53
SEC13-218ENST00000490283 MYH10P35580 1976 aa18.33■□□□□ 0.53
SEC13-218ENST00000490283 HOXC11O43248 304 aaPredicted RBP18.33■□□□□ 0.52
SEC13-218ENST00000490283 ZBED1O96006 694 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 GRIA2P42262 883 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 YWHAGP61981 247 aaKnown RBP eCLIP18.33■□□□□ 0.52
SEC13-218ENST00000490283 COG7P83436 770 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 GCNT1Q02742 428 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 DMC1Q14565 340 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 RAB41Q5JT25 222 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 LAIR1Q6GTX8 287 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.33■□□□□ 0.52
SEC13-218ENST00000490283 SCD5Q86SK9 330 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 MIB1Q86YT6 1006 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 KIAA2013Q8IYS2 634 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 UBR7Q8N806 425 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 CNOT6LQ96LI5 555 aaKnown RBP18.33■□□□□ 0.52
SEC13-218ENST00000490283 INTS2Q9H0H0 1204 aaKnown RBP18.33■□□□□ 0.52
SEC13-218ENST00000490283 DACH1Q9UI36 760 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 NUDT5Q9UKK9 219 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 ZNF510Q9Y2H8 683 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 FANCMQ8IYD8 2048 aa18.33■□□□□ 0.52
SEC13-218ENST00000490283 O00370 1275 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 MDM4O15151 490 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 KAT7O95251 611 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 APBB3O95704 486 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 MRPS21P82921 87 aaKnown RBP18.32■□□□□ 0.52
SEC13-218ENST00000490283 KDSRQ06136 332 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 EFEMP1Q12805 493 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 LPAL2Q16609 132 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 GAB4Q2WGN9 574 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 C2orf27AQ580R0 203 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 RRAGAQ7L523 313 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 RBBP8NLQ8NC74 664 aaPredicted RBP18.32■□□□□ 0.52
SEC13-218ENST00000490283 LMO3Q8TAP4 145 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 UBA3Q8TBC4 463 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 USP33Q8TEY7 942 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 EZH1Q92800 747 aaPredicted RBP18.32■□□□□ 0.52
SEC13-218ENST00000490283 FAM81BQ96LP2 452 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 XPO6Q96QU8 1125 aaKnown RBP18.32■□□□□ 0.52
SEC13-218ENST00000490283 HHIPQ96QV1 700 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 ULBP1Q9BZM6 244 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 DCLK3Q9C098 648 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 NUP62CLQ9H1M0 184 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 OLA1Q9NTK5 396 aaKnown RBP18.32■□□□□ 0.52
SEC13-218ENST00000490283 WDR35Q9P2L0 1181 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 DEC1Q9P2X7 70 aa18.32■□□□□ 0.52
SEC13-218ENST00000490283 MYO15AQ9UKN7 3530 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 K7EQS6 105 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 M0QYV0 167 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 KRT5P13647 590 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 SLC6A11P48066 632 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 PXNP49023 591 aaPredicted RBP18.31■□□□□ 0.52
SEC13-218ENST00000490283 ADIGQ0VDE8 80 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 HSF5Q4G112 596 aaPredicted RBP18.31■□□□□ 0.52
SEC13-218ENST00000490283 LCLAT1Q6UWP7 414 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 ENOSF1Q7L5Y1 443 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 FAM114A1Q8IWE2 563 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 DCLK2Q8N568 766 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 NAT16Q8N8M0 369 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 TSTD1Q8NFU3 115 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 RNF139Q8WU17 664 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 BBS2Q9BXC9 721 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 USP34Q70CQ2 3546 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 MYO16Q9Y6X6 1858 aa18.31■□□□□ 0.52
SEC13-218ENST00000490283 TBC1D3BA6NDS4 549 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 NEDD8-MDP1E9PL57 170 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 AXIN1O15169 862 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 HRO43593 1189 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 RPP40O75818 363 aaKnown RBP18.3■□□□□ 0.52
SEC13-218ENST00000490283 TNFRSF4P43489 277 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 MTIF2P46199 727 aaKnown RBP18.3■□□□□ 0.52
SEC13-218ENST00000490283 CNGA2Q16280 664 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 PM20D1Q6GTS8 502 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 TPGS1Q6ZTW0 290 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 TRMT11Q7Z4G4 463 aaKnown RBP18.3■□□□□ 0.52
SEC13-218ENST00000490283 C12orf40Q86WS4 652 aa18.3■□□□□ 0.52
SEC13-218ENST00000490283 TMEM25Q86YD3 366 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms