RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 LONP2Q86WA8 852 aa20.77■□□□□ 0.92
SMC4-222ENST00000490207 CDK5RAP1Q96SZ6 601 aaKnown RBP20.77■□□□□ 0.92
SMC4-222ENST00000490207 CLIC5Q9NZA1 410 aa20.77■□□□□ 0.92
SMC4-222ENST00000490207 KIAA1257Q9ULG3 409 aa20.77■□□□□ 0.92
SMC4-222ENST00000490207 SLC8A2Q9UPR5 921 aa20.77■□□□□ 0.92
SMC4-222ENST00000490207 TULP2O00295 520 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 SETSIPP0DME0 302 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 EIF2DP41214 584 aaKnown RBP20.76■□□□□ 0.91
SMC4-222ENST00000490207 GAD2Q05329 585 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 CLEC17AQ6ZS10 378 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 C12orf40Q86WS4 652 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 CREBRFQ8IUR6 639 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 ARHGAP18Q8N392 663 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 ZNF276Q8N554 614 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 RBBP8NLQ8NC74 664 aaPredicted RBP20.76■□□□□ 0.91
SMC4-222ENST00000490207 CCDC26Q8TAB7 109 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 UBA3Q8TBC4 463 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 RUBCNQ92622 972 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 ACDQ96AP0 544 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 MED15Q96RN5 788 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 ULBP1Q9BZM6 244 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 NCDNQ9UBB6 729 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 RASAL2Q9UJF2 1139 aa20.76■□□□□ 0.91
SMC4-222ENST00000490207 RIF1Q5UIP0 2472 aaKnown RBP20.75■□□□□ 0.91
SMC4-222ENST00000490207 HOXA6P31267 233 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 HOXC13P31276 330 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 PLA2G4AP47712 749 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 SLC6A11P48066 632 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 YWHAGP61981 247 aaKnown RBP eCLIP20.75■□□□□ 0.91
SMC4-222ENST00000490207 KDSRQ06136 332 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 ADIGQ0VDE8 80 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 HTR3DQ70Z44 454 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 WDR5BQ86VZ2 330 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 PNKPQ96T60 521 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 LRRC4Q9HBW1 653 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 SPHK2Q9NRA0 654 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 EML5Q05BV3 1969 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 CFAP54Q96N23 3096 aa20.75■□□□□ 0.91
SMC4-222ENST00000490207 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.74■□□□□ 0.91
SMC4-222ENST00000490207 K7EQS6 105 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 M0QYV0 167 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 RNF225M0QZC1 329 aaPredicted RBP20.74■□□□□ 0.91
SMC4-222ENST00000490207 HOXC11O43248 304 aaPredicted RBP20.74■□□□□ 0.91
SMC4-222ENST00000490207 GREM1O60565 184 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 ZBED1O96006 694 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 APODP05090 189 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 BRD2P25440 801 aaKnown RBP20.74■□□□□ 0.91
SMC4-222ENST00000490207 SEC13P55735 322 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 EFEMP1Q12805 493 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 STILQ15468 1287 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 TPD52L1Q16890 204 aaPredicted RBP20.74■□□□□ 0.91
SMC4-222ENST00000490207 ANO4Q32M45 955 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 DPCR1Q3MIW9 517 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 BTBD8Q5XKL5 378 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 LCLAT1Q6UWP7 414 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 MIB1Q86YT6 1006 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 SIX6OS1Q8N1H7 587 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 TFAP2BQ92481 460 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 KREMEN1Q96MU8 473 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 RAB23Q9ULC3 237 aa20.74■□□□□ 0.91
SMC4-222ENST00000490207 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.74■□□□□ 0.91
SMC4-222ENST00000490207 OTOGLQ3ZCN5 2332 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 CNR2P34972 360 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 ZNF132P52740 706 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 PKDCCQ504Y2 493 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 PRR23BQ6ZRT6 265 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 RSRC2Q7L4I2 434 aaKnown RBP20.73■□□□□ 0.91
SMC4-222ENST00000490207 SYT13Q7L8C5 426 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 USP33Q8TEY7 942 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 SECISBP2LQ93073 1101 aaKnown RBP20.73■□□□□ 0.91
SMC4-222ENST00000490207 IPO9Q96P70 1041 aaKnown RBP20.73■□□□□ 0.91
SMC4-222ENST00000490207 HHIPQ96QV1 700 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 ARHGEF4Q9NR80 690 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 LMBRD1Q9NUN5 540 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 POLR3BQ9NW08 1133 aaPredicted RBP20.73■□□□□ 0.91
SMC4-222ENST00000490207 DACH1Q9UI36 760 aa20.73■□□□□ 0.91
SMC4-222ENST00000490207 STC2O76061 302 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 KAT7O95251 611 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 CALCAP01258 141 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 KRT5P13647 590 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 MTIF2P46199 727 aaKnown RBP20.72■□□□□ 0.91
SMC4-222ENST00000490207 PXNP49023 591 aaPredicted RBP20.72■□□□□ 0.91
SMC4-222ENST00000490207 MESP2Q0VG99 397 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 SRSF5Q13243 272 aaKnown RBP20.72■□□□□ 0.91
SMC4-222ENST00000490207 DMC1Q14565 340 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 LPAL2Q16609 132 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 PM20D1Q6GTS8 502 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 Q6ZNB5 142 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 BHLHA9Q7RTU4 235 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 TMEM25Q86YD3 366 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 ETFBKMTQ8IXQ9 262 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 DCLK2Q8N568 766 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 CAMKK1Q8N5S9 505 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 NAT16Q8N8M0 369 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 KCTD13Q8WZ19 329 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 NDRG1Q92597 394 aaKnown RBP20.72■□□□□ 0.91
SMC4-222ENST00000490207 GBP4Q96PP9 640 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 ZSWIM1Q9BR11 485 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 CRACR2AQ9BSW2 395 aa20.72■□□□□ 0.91
SMC4-222ENST00000490207 THAP9Q9H5L6 903 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms