RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 TCEAL9Q9UHQ7 104 aa4.59□□□□□ -1.67
HMGN1-218ENST00000490032 GOLGA6CA6NDK9 693 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 GOLGA6BA6NDN3 693 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 SOCS2O14508 198 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 MGEA5O60502 916 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 RNF8O76064 485 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 MAP4K4O95819 1239 aaPredicted RBP4.58□□□□□ -1.68
HMGN1-218ENST00000490032 GOLGA6DP0CG33 693 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 RPL17P18621 184 aaKnown RBP4.58□□□□□ -1.68
HMGN1-218ENST00000490032 PEX2P28328 305 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 CARSP49589 748 aaKnown RBP4.58□□□□□ -1.68
HMGN1-218ENST00000490032 PLCD1P51178 756 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 HTRA4P83105 476 aaPredicted RBP4.58□□□□□ -1.68
HMGN1-218ENST00000490032 CFHR1Q03591 330 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 DEUP1Q05D60 604 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 SRSF1Q07955 248 aaKnown RBP eCLIP4.58□□□□□ -1.68
HMGN1-218ENST00000490032 STK3Q13188 491 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 KCNB1Q14721 858 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 CLCA4Q14CN2 919 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 ST3GAL2Q16842 350 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 TMTC4Q5T4D3 741 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 VSTM1Q6UX27 236 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 RANBP10Q6VN20 620 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 UNC13DQ70J99 1090 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 TECPR1Q7Z6L1 1165 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 MYO1HQ8N1T3 1032 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 NANOGP1Q8N7R0 232 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 C12orf76Q8N812 135 aaPredicted RBP4.58□□□□□ -1.68
HMGN1-218ENST00000490032 PNPLA1Q8N8W4 532 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 NGDNQ8NEJ9 315 aaKnown RBP4.58□□□□□ -1.68
HMGN1-218ENST00000490032 IPCEF1Q8WWN9 437 aaPredicted RBP4.58□□□□□ -1.68
HMGN1-218ENST00000490032 SIGLEC11Q96RL6 698 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 SELENOOQ9BVL4 669 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 BTBD1Q9H0C5 482 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 ZCWPW1Q9H0M4 648 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 GOLGA6AQ9NYA3 693 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 DNAJB11Q9UBS4 358 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 STEAP1Q9UHE8 339 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 ITGB1BP2Q9UKP3 347 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 ASAP1Q9ULH1 1129 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 MAFFQ9ULX9 164 aa4.58□□□□□ -1.68
HMGN1-218ENST00000490032 COL15A1P39059 1388 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 LY6G6EA0A0G2JKS1 128 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 VSTM5A8MXK1 200 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 NTN1O95631 604 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 MT-ND5P03915 603 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 RHCEP18577 417 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 ADRA1DP25100 572 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 HOXD9P28356 352 aaPredicted RBP4.57□□□□□ -1.68
HMGN1-218ENST00000490032 CCT4P50991 539 aaKnown RBP4.57□□□□□ -1.68
HMGN1-218ENST00000490032 COPAP53621 1224 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 FOXG1P55316 489 aaPredicted RBP4.57□□□□□ -1.68
HMGN1-218ENST00000490032 RHDQ02161 417 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 SEMA5AQ13591 1074 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 GALEQ14376 348 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 GFOD2Q3B7J2 385 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 MANEALQ5VSG8 457 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 SHC4Q6S5L8 630 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 BHLHA9Q7RTU4 235 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 PIP4P1Q86T03 277 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 SDR16C5Q8N3Y7 309 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 NRACQ8N912 160 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 CUL5Q93034 780 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 HIST1H2AAQ96QV6 131 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 STRBPQ96SI9 672 aaKnown RBP4.57□□□□□ -1.68
HMGN1-218ENST00000490032 MTMR4Q9NYA4 1195 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 FZD4Q9ULV1 537 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 SLC27A6Q9Y2P4 619 aa4.57□□□□□ -1.68
HMGN1-218ENST00000490032 FRMPD2Q68DX3 1309 aaPredicted RBP4.56□□□□□ -1.68
HMGN1-218ENST00000490032 LOC105371045A0A1W2PR82 267 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 CLIC1O00299 241 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 ADAM10O14672 748 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 TLR2O60603 784 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 CNOT3O75175 753 aaKnown RBP4.56□□□□□ -1.68
HMGN1-218ENST00000490032 RBL1P28749 1068 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 NTSR1P30989 418 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 HTR7P34969 479 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 EIF4A1P60842 406 aaKnown RBP4.56□□□□□ -1.68
HMGN1-218ENST00000490032 GPC5P78333 572 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 KCNAB1Q14722 419 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 MFSD13AQ14CX5 517 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 RBMS2Q15434 407 aaKnown RBP4.56□□□□□ -1.68
HMGN1-218ENST00000490032 ANO7Q6IWH7 933 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 UBE2Q1Q7Z7E8 422 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 C11orf44Q8N8P7 122 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 IGFBPL1Q8WX77 278 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 HIC2Q96JB3 615 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 SNX22Q96L94 193 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 FAM227BQ96M60 508 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 HS6ST2Q96MM7 605 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 OBP2AQ9NY56 170 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 SEMA5BQ9P283 1151 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 PI4KBQ9UBF8 816 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 TTC3P53804 2025 aa4.56□□□□□ -1.68
HMGN1-218ENST00000490032 ZMYM2Q9UBW7 1377 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 SPATA31A1Q5TZJ5 1347 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 SNX2O60749 519 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 TMEM191BP0C7N4 346 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 PRF1P14222 555 aa4.55□□□□□ -1.68
HMGN1-218ENST00000490032 SLC14A1Q13336 389 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms