RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 SH3BP1Q9Y3L3 701 aa20.49■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TULP3O75386 442 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 KLF8O95600 359 aaPredicted RBP20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 APODP05090 189 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 IRF1P10914 325 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ACO1P21399 889 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 MPLP40238 635 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PRCPP42785 496 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 KIF11P52732 1056 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ANO7Q6IWH7 933 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 SCD5Q86SK9 330 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ZC3H3Q8IXZ2 948 aaKnown RBP20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 OLIG1Q8TAK6 271 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 SPATA20Q8TB22 786 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 JAKMIP2Q96AA8 810 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 P2RY11Q96G91 374 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PCDHA5Q9Y5H7 936 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 USP3Q9Y6I4 520 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PLXND1Q9Y4D7 1925 aa20.48■□□□□ 0.87
TNFRSF1B-202ENST00000489921 A0A1W2PQH9 124 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 BCKDHBP21953 392 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ATP5C1P36542 298 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 LIMK1P53667 647 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PMS1P54277 932 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ZNF394Q53GI3 561 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 COBLL1Q53SF7 1204 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 SLC4A11Q8NBS3 891 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ERCC4Q92889 916 aaPredicted RBP20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TATDN2Q93075 761 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 FAXDC2Q96IV6 333 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ARID3AQ99856 593 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 DUSP16Q9BY84 665 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 RAB20Q9NX57 234 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 NUDT5Q9UKK9 219 aa20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TNRC6BQ9UPQ9 1833 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CNOT1A5YKK6 2376 aaKnown RBP20.47■□□□□ 0.87
TNFRSF1B-202ENST00000489921 BCLAF3A2AJT9 711 aaKnown RBP20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 MDM4O15151 490 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 RAD23BP54727 409 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 HSF5Q4G112 596 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 AASDHQ4L235 1098 aaPredicted RBP20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CBWD6Q4V339 395 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 USP39Q53GS9 565 aaKnown RBP20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CBWD3Q5JTY5 395 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CBWD5Q5RIA9 395 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 PMS2CLQ68D20 193 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TCEAL6Q6IPX3 200 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 KLHDC10Q6PID8 442 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 ZNF276Q8N554 614 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 FBXL13Q8NEE6 735 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 TCEAL3Q969E4 200 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 NACA2Q9H009 215 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 VPS45Q9NRW7 570 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CISHQ9NSE2 258 aa20.46■□□□□ 0.87
TNFRSF1B-202ENST00000489921 CETN3O15182 167 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 RHOBTB1O94844 696 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 RARGP13631 454 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 MXI1P50539 228 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ANO4Q32M45 955 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 PPM1JQ5JR12 505 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ZNF658Q5TYW1 1059 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ANKRD40Q6AI12 368 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 Q6ZNB5 142 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CCDC186Q7Z3E2 898 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 MIB1Q86YT6 1006 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 FRMD1Q8N878 549 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 GSDMAQ96QA5 445 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 DEC1Q9P2X7 70 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 COQ4Q9Y3A0 265 aa20.45■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TBC1D3BA6NDS4 549 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ADRB1P08588 477 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CREB5Q02930 508 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 ELF2Q15723 593 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 STPG1Q5TH74 334 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TERB1Q8NA31 727 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 C12orf50Q8NA57 414 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 RLN3Q8WXF3 142 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 TMEM176AQ96HP8 235 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 HEXIM2Q96MH2 286 aaKnown RBP20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CD248Q9HCU0 757 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 MARK1Q9P0L2 795 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 STARD13Q9Y3M8 1113 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CHD8Q9HCK8 2581 aa20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 KMT2BQ9UMN6 2715 aaPredicted RBP20.44■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CACNG3O60359 315 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 KLKB1P03952 638 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 EPB41P11171 864 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 GBP1P32455 592 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 P2RY2P41231 377 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 RAB41Q5JT25 222 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 EOGTQ5NDL2 527 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 BTBD8Q5XKL5 378 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 CCDC150Q8NCX0 1101 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 KCNV2Q8TDN2 545 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 UBXN6Q9BZV1 441 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 RMND1Q9NWS8 449 aa20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 MBD1Q9UIS9 605 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1B-202ENST00000489921 DNMT3LQ9UJW3 386 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms