RNA–Protein interactions for RNA: ENST00000489500.1

TNRC6B-208, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 2

Gene TNRC6B, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-208ENST00000489500 FAM3CQ92520 227 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 CLIC6Q96NY7 704 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 USP28Q96RU2 1077 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 FIZ1Q96SL8 496 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 PANK2Q9BZ23 570 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 FOXQ1Q9C009 403 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 ZNF334Q9HCZ1 680 aaPredicted RBP9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 OBP2AQ9NY56 170 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 TBC1D7Q9P0N9 293 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 UXTQ9UBK9 157 aaPredicted RBP9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 CFAP45Q9UL16 551 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 RAB23Q9ULC3 237 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 MTMR6Q9Y217 621 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 PCDHB5Q9Y5E4 795 aa9.49□□□□□ -0.89
TNRC6B-208ENST00000489500 CACNA1IQ9P0X4 2223 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 PTPRZ1P23471 2315 aaPredicted RBP9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 TSC2P49815 1807 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 HEPACAM2A8MVW5 462 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 CHADO15335 359 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 MEFVO15553 781 aaPredicted RBP9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 CUTAO60888 179 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 YEATS4O95619 227 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 KRT19P08727 400 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 OR4Q2P0C623 313 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 SP9P0CG40 484 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 DDX6P26196 483 aaKnown RBP eCLIP9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 GABRR2P28476 465 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 PCSK1P29120 753 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 LHX1P48742 406 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 NASPP49321 788 aaPredicted RBP9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 SNRPFP62306 86 aaKnown RBP9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 CSTF1Q05048 431 aaKnown RBP9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 BFSP1Q12934 665 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 GRM2Q14416 872 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 GPR158Q5T848 1215 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 SLC39A4Q6P5W5 647 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 USP49Q70CQ1 688 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 DPH6Q7L8W6 267 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 ASCL5Q7RTU5 278 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 BRSK2Q8IWQ3 736 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 CSGALNACT2Q8N6G5 542 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 LRRC52Q8N7C0 313 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 ATAD1Q8NBU5 361 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 SNX21Q969T3 373 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 DNAJC19Q96DA6 116 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 TCEAL4Q96EI5 215 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 YIPF2Q9BWQ6 316 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 ZCWPW1Q9H0M4 648 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 HEBP1Q9NRV9 189 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 RAD18Q9NS91 495 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 EHD2Q9NZN4 543 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 DLGAP2Q9P1A6 1054 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 ADGRE2Q9UHX3 823 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 AGAP1Q9UPQ3 857 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 PCDHGA2Q9Y5H1 932 aa9.48□□□□□ -0.89
TNRC6B-208ENST00000489500 EIF1AYO14602 144 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 EIF3DO15371 548 aaKnown RBP eCLIP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 ITGB3P05106 788 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CSH1P0DML2 217 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CSH2P0DML3 217 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 HAPLN1P10915 354 aaPredicted RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 TRIM21P19474 475 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 SDHBP21912 280 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 POLR2BP30876 1174 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 AVPR1AP37288 418 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CCR3P51677 355 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 ASIC1P78348 528 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 MAPRE1Q15691 268 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CPSF6Q16630 551 aaKnown RBP eCLIP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 WSCD1Q658N2 575 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CC2D1AQ6P1N0 951 aaPredicted RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 FAM173BQ6P4H8 233 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 VITQ6UXI7 678 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 C4orf50Q6ZRC1 276 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 HS2ST1Q7LGA3 356 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CEP57L1Q8IYX8 460 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CELF5Q8N6W0 485 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 FSIP1Q8NA03 581 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 LINC00301Q8NCQ3 95 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 RUBCNQ92622 972 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 MRPS31Q92665 395 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CCDC74AQ96AQ1 378 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CLDN23Q96B33 292 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 DHX58Q96C10 678 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 SAAL1Q96ER3 474 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 FNBP1Q96RU3 617 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 ACBD6Q9BR61 282 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 PLA2G2FQ9BZM2 168 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 SEMA6CQ9H3T2 930 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 TASP1Q9H6P5 420 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 ABCB6Q9NP58 842 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 ZSCAN32Q9NX65 697 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 CGNQ9P2M7 1197 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 NCDNQ9UBB6 729 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 NDRG2Q9UN36 371 aaKnown RBP9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 PIAS3Q9Y6X2 628 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 FAM186AA6NE01 2351 aa9.47□□□□□ -0.89
TNRC6B-208ENST00000489500 UBE4BO95155 1302 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms