RNA–Protein interactions for RNA: ENST00000488944.5

WDR46-238, Transcript of WD repeat domain 46, human

TSL 3

Gene WDR46, Length 538 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-238	ENST00000488944	ASS1	P00966	412 aa	Known RBP	13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	RPN1	P04843	607 aa	Known RBP	13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	TRIM49	P0CI25	452 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	TRIM49C	P0CI26	452 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	PDIA4	P13667	645 aa	Known RBP	13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	PTGER3	P43115	390 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	MAP7D1	Q3KQU3	841 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	HSF5	Q4G112	596 aa	Predicted RBP	13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	C10orf76	Q5T2E6	689 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	ATL3	Q6DD88	541 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	CLEC20A	Q6ZU45	233 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	MIB1	Q86YT6	1006 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	CRYBG2	Q8N1P7	616 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	TERB1	Q8NA31	727 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	TMC2	Q8TDI7	906 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	SPACA7	Q96KW9	195 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	MMRN2	Q9H8L6	949 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	NMUR1	Q9HB89	426 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	CSNK1G1	Q9HCP0	422 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	TMEM9B	Q9NQ34	198 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	TLR8	Q9NR97	1041 aa	Known RBP	13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	COMMD8	Q9NX08	183 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	OSER1	Q9NX31	292 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	NUDT5	Q9UKK9	219 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	HCN2	Q9UL51	889 aa		13.63	□□□□□ -0.23
WDR46-238	ENST00000488944	FRY	Q5TBA9	3013 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	CDX4	O14627	284 aa	Predicted RBP	13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	CYP26A1	O43174	497 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	GREM1	O60565	184 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	FAM200B	P0CF97	657 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	HOXB2	P14652	356 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	GCLM	P48507	274 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	VAMP7	P51809	220 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	UAP1L1	Q3KQV9	507 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	SH3PXD2A	Q5TCZ1	1133 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	DAB2IP	Q5VWQ8	1189 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	EGFLAM	Q63HQ2	1017 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	LPCAT2	Q7L5N7	544 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	UNC93A	Q86WB7	457 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	DEFB119	Q8N690	84 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	TAF4B	Q92750	862 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	KLF16	Q9BXK1	252 aa	Predicted RBP	13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	FBXO44	Q9H4M3	255 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	APOBEC3G	Q9HC16	384 aa	Known RBP	13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	TMEM74B	Q9NUR3	256 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	DNAJC17	Q9NVM6	304 aa	Known RBP	13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	MAPK8IP1	Q9UQF2	711 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	FRMD4B	Q9Y2L6	1034 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944	CACNA1E	Q15878	2313 aa		13.62	□□□□□ -0.23
WDR46-238	ENST00000488944		A0A1W2PQH9	124 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	HHLA1	C9JL84	531 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	NEDD8-MDP1	E9PL57	170 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	IKBKB	O14920	756 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	CALU	O43852	315 aa	Predicted RBP	13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	GABRG2	P18507	467 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	CD58	P19256	250 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	ACO1	P21399	889 aa	Known RBP	13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	CMA1	P23946	247 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	NR2F2	P24468	414 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	SHC2	P98077	582 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	PPP3CA	Q08209	521 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	ZNF252P-AS1	Q0IIN9	211 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	TRIM61	Q5EBN2	209 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	GRAMD4	Q6IC98	578 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	TPGS1	Q6ZTW0	290 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	HTR3D	Q70Z44	454 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	TAS1R2	Q8TE23	839 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	TMEM174	Q8WUU8	243 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	BHMT	Q93088	406 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	CYFIP2	Q96F07	1278 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	ACOX2	Q99424	681 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	HNRNPAB	Q99729	332 aa	Known RBP	13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	BBS2	Q9BXC9	721 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	CYLD	Q9NQC7	956 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	FSCN3	Q9NQT6	498 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	TRAF3IP3	Q9Y228	551 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	HPSE	Q9Y251	543 aa		13.61	□□□□□ -0.23
WDR46-238	ENST00000488944	PCNX2	A6NKB5	2137 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	KIF20A	O95235	890 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	RARG	P13631	454 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	TYR	P14679	529 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	SPINK2	P20155	84 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	ITPKA	P23677	461 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	ATP5C1	P36542	298 aa	Known RBP	13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	MAPK8	P45983	427 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	NDUFA8	P51970	172 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	INCA1	Q0VD86	236 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	FOXC1	Q12948	553 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	LYSMD4	Q5XG99	296 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	TOGARAM2	Q6ZUX3	1019 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	TRMT11	Q7Z4G4	463 aa	Known RBP	13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	SYT12	Q8IV01	421 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	SPATA32	Q96LK8	384 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	DUSP9	Q99956	384 aa	Known RBP	13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	NT5C1A	Q9BXI3	368 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	IMPG2	Q9BZV3	1241 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	PLK2	Q9NYY3	685 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	CALCOCO1	Q9P1Z2	691 aa		13.6	□□□□□ -0.23
WDR46-238	ENST00000488944	USP25	Q9UHP3	1055 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms