RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 TAF1DQ9H5J8 278 aaPredicted RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 GRPEL1Q9HAV7 217 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 CYP4F11Q9HBI6 524 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 A1CFQ9NQ94 594 aaKnown RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 EIF2B3Q9NR50 452 aaKnown RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 SEPT11Q9NVA2 429 aaKnown RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 SIDT1Q9NXL6 827 aaKnown RBP3.73□□□□□ -1.81
PRPF4-203ENST00000488937 RBPJLQ9UBG7 517 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 ZDHHC8Q9ULC8 765 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 NAALADL1Q9UQQ1 740 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 DERAQ9Y315 318 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 ABCC9O60706 1549 aa3.73□□□□□ -1.81
PRPF4-203ENST00000488937 RPTORQ8N122 1335 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 A0A087WWL8 130 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 A0A1W2PR48 441 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 FAM90A18PA6NE21 464 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 FAM90A16PA6NEW6 464 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 FAM90A9PA6NNJ1 464 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 FAM90A5PA8MXJ8 464 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 GOLGA6L6A8MZA4 724 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 SH2B2O14492 632 aaPredicted RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 VILLO15195 856 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 MTSS1O43312 755 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 TBC1D4O60343 1298 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 TSPAN3O60637 253 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 CUTAO60888 179 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 RAMP2O60895 175 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 BEST1O76090 585 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 FAM90A15PP0C7V4 464 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 FAM90A14PP0C7W9 464 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 SRGAP2BP0DMP2 458 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 BTF3P20290 206 aaKnown RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 EPHA8P29322 1005 aaPredicted RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 KRT2P35908 639 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 RGS2P41220 211 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 HNF4AP41235 474 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 TDO2P48775 406 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 CDK7P50613 346 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 PDE6CP51160 858 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 PPP5CP53041 499 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 PPARDQ03181 441 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 EXOSC9Q06265 439 aaKnown RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 DBPQ10586 325 aaPredicted RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 TUBA3CQ13748 450 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 ANKRD1Q15327 319 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 PTPN14Q15678 1187 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 SLC44A4Q53GD3 710 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 PARP10Q53GL7 1025 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 C1orf141Q5JVX7 400 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 CC2D1BQ5T0F9 858 aaKnown RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 MEX3CQ5U5Q3 659 aaKnown RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 AGBL4Q5VU57 503 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 RAP1GAP2Q684P5 730 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 VASNQ6EMK4 673 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 ANO7Q6IWH7 933 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 TUBA3EQ6PEY2 450 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 C11orf88Q6PI97 169 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 SLC22A25Q6T423 547 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 FAM180AQ6UWF9 173 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 TMC5Q6UXY8 1006 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 UNC5DQ6UXZ4 953 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 DENND5BQ6ZUT9 1274 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 RAB11FIP2Q7L804 512 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 POLNQ7Z5Q5 900 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 BMP8AQ7Z5Y6 402 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 SLFN11Q7Z7L1 901 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 REXO1L1PQ8IX06 675 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 DIS3L2Q8IYB7 885 aaKnown RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 ZGPATQ8N5A5 531 aaKnown RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 KCTD6Q8NC69 237 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 CCDC150Q8NCX0 1101 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 STON2Q8WXE9 905 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 TMX3Q96JJ7 454 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 TSGA13Q96PP4 275 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 LRRC37BQ96QE4 947 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 NOL10Q9BSC4 688 aaKnown RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 C1orf43Q9BWL3 253 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 AMNQ9BXJ7 453 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 PCDHAC1Q9H158 963 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 ERVMER34-1Q9H9K5 563 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 DECR2Q9NUI1 292 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 MID2Q9UJV3 735 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 GTF3C4Q9UKN8 822 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 ZMYND8Q9ULU4 1186 aaPredicted RBP3.72□□□□□ -1.81
PRPF4-203ENST00000488937 DAPP1Q9UN19 280 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 DNAJC16Q9Y2G8 782 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 SH3BP1Q9Y3L3 701 aa3.72□□□□□ -1.81
PRPF4-203ENST00000488937 SYNRGQ9UMZ2 1314 aa3.71□□□□□ -1.81
PRPF4-203ENST00000488937 KDM3AQ9Y4C1 1321 aa3.71□□□□□ -1.81
PRPF4-203ENST00000488937 PRSS29PA6NIE9 313 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 FAM90A20PA6NIJ5 464 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 A8MXE2 369 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 FYB1O15117 783 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 DHHO43323 396 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 DNPH1O43598 174 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 PHF2O75151 1096 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 TBX10O75333 385 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 RAD17O75943 681 aa3.71□□□□□ -1.82
PRPF4-203ENST00000488937 TFRCP02786 760 aaKnown RBP3.71□□□□□ -1.82
PRPF4-203ENST00000488937 TUBB4AP04350 444 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms