RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 LRRC38Q5VT99 294 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 TBC1D31Q96DN5 1066 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 CGRRF1Q99675 332 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 ZNF623O75123 536 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 MLLT1Q03111 559 aaPredicted RBP19.11■□□□□ 0.65
COL16A1-215ENST00000488897 PCBP1Q15365 356 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL16A1-215ENST00000488897 ZFYVE27Q5T4F4 411 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 ALKAL1Q6UXT8 129 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 MRPL10Q7Z7H8 261 aaKnown RBP19.11■□□□□ 0.65
COL16A1-215ENST00000488897 TRABD2AQ86V40 505 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 BRSK2Q8IWQ3 736 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 CASD1Q96PB1 797 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 SLITRK1Q96PX8 696 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 GDF15Q99988 308 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 ZBED2Q9BTP6 218 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 CERS4Q9HA82 394 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 SENP1Q9P0U3 644 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 DNPEPQ9ULA0 475 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 ANK1P16157 1881 aa19.11■□□□□ 0.65
COL16A1-215ENST00000488897 ABHD14A-ACY1A0A1B0GW23 586 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 I3L4J1 428 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 ITGB1P05556 798 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 KRT19P08727 400 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 MMP8P22894 467 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 RGS19P49795 217 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 YARSP54577 528 aaKnown RBP19.1■□□□□ 0.65
COL16A1-215ENST00000488897 NOP14P78316 857 aaKnown RBP19.1■□□□□ 0.65
COL16A1-215ENST00000488897 CGB2Q6NT52 195 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 ALLCQ8N6M5 410 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 PPCSQ9HAB8 311 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 TMEM161AQ9NX61 479 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 SLC4A7Q9Y6M7 1214 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 TMEM191CA6NGB0 347 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 PRPF4O43172 522 aaKnown RBP eCLIP19.1■□□□□ 0.65
COL16A1-215ENST00000488897 CALB1P05937 261 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 TMEM191BP0C7N4 346 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 FOXN2P32314 431 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 MORF4L2Q15014 288 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 KAZNQ674X7 775 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 ASRGL1Q7L266 308 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 PRUNE1Q86TP1 453 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 TMEM173Q86WV6 379 aaPredicted RBP19.1■□□□□ 0.65
COL16A1-215ENST00000488897 ZNF606Q8WXB4 792 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 EBF2Q9HAK2 575 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 STARD13Q9Y3M8 1113 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 NUB1Q9Y5A7 615 aa19.1■□□□□ 0.65
COL16A1-215ENST00000488897 PARNO95453 639 aaKnown RBP19.09■□□□□ 0.65
COL16A1-215ENST00000488897 ASMTLO95671 621 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 KRT1P04264 644 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 KRT10P13645 584 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 ATP2A2P16615 1042 aaKnown RBP19.09■□□□□ 0.65
COL16A1-215ENST00000488897 ARSEP51690 589 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 WDR4P57081 412 aaKnown RBP19.09■□□□□ 0.65
COL16A1-215ENST00000488897 ADCY1Q08828 1119 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 RMDN2Q96LZ7 410 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 TBC1D13Q9NVG8 400 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 SMG5Q9UPR3 1016 aaKnown RBP19.09■□□□□ 0.65
COL16A1-215ENST00000488897 MYO7AQ13402 2215 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 PI4K2BG5E9Z4 385 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 DGKIO75912 1065 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 CCNB1P14635 433 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 CCND1P24385 295 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 SSTR3P32745 418 aaPredicted RBP19.09■□□□□ 0.65
COL16A1-215ENST00000488897 PTPN7P35236 360 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 CLCNKBP51801 687 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 RNASELQ05823 741 aaKnown RBP19.09■□□□□ 0.65
COL16A1-215ENST00000488897 SPARCL1Q14515 664 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 ATP13A4Q4VNC1 1196 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 MFSD7Q6UXD7 560 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 ABI1Q8IZP0 508 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 FBF1Q8TES7 1133 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 N4BP2L2Q92802 583 aaPredicted RBP19.09■□□□□ 0.65
COL16A1-215ENST00000488897 IMPG2Q9BZV3 1241 aa19.09■□□□□ 0.65
COL16A1-215ENST00000488897 PRG3Q9Y2Y8 225 aaPredicted RBP19.09■□□□□ 0.65
COL16A1-215ENST00000488897 BCAR1P56945 870 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 RPL7AP62424 266 aaKnown RBP19.08■□□□□ 0.64
COL16A1-215ENST00000488897 GPS1Q13098 491 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 RGS9BPQ6ZS82 235 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 C3orf58Q8NDZ4 430 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 DENND1AQ8TEH3 1009 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 PAIP2Q9BPZ3 127 aaKnown RBP19.08■□□□□ 0.64
COL16A1-215ENST00000488897 TRABDQ9H4I3 376 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 KLHL11Q9NVR0 708 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 ALOX15BO15296 676 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 ATP5HO75947 161 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 LSM8O95777 96 aaKnown RBP19.08■□□□□ 0.64
COL16A1-215ENST00000488897 AMHP03971 560 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 ITGB3P05106 788 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 PECAM1P16284 738 aaPredicted RBP19.08■□□□□ 0.64
COL16A1-215ENST00000488897 GCAP28676 217 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 ZNF132P52740 706 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 MGAT5Q09328 741 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 NCOA4Q13772 614 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 RASA2Q15283 850 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 CCDC142Q17RM4 750 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 TLDC1Q6P9B6 456 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 GLB1LQ6UWU2 654 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 SPOCD1Q6ZMY3 1216 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 C1orf127Q8N9H9 656 aa19.08■□□□□ 0.64
COL16A1-215ENST00000488897 B3GALT6Q96L58 329 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms