RNA–Protein interactions for RNA: ENST00000488860.1

TRAIP-209, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 326 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-209ENST00000488860 LEMD2Q8NC56 503 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 SHKBP1Q8TBC3 707 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 ZNF564Q8TBZ8 553 aaPredicted RBP12.9□□□□□ -0.34
TRAIP-209ENST00000488860 RNF139Q8WU17 664 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 ATRIPQ8WXE1 791 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 MRPS31Q92665 395 aaKnown RBP12.9□□□□□ -0.34
TRAIP-209ENST00000488860 TRIM62Q9BVG3 475 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 LRRC3Q9BY71 257 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 NACA2Q9H009 215 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 SLITRK6Q9H5Y7 841 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 UBE2ZQ9H832 354 aaPredicted RBP12.9□□□□□ -0.34
TRAIP-209ENST00000488860 POPDC2Q9HBU9 364 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 MRPL47Q9HD33 250 aaKnown RBP12.9□□□□□ -0.34
TRAIP-209ENST00000488860 ASNSD1Q9NWL6 643 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 OSER1Q9NX31 292 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 TRIM10Q9UDY6 481 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 CD207Q9UJ71 328 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 ANAPC7Q9UJX3 599 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 NUDT5Q9UKK9 219 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 PPP2R2CQ9Y2T4 447 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 MRPS23Q9Y3D9 190 aaKnown RBP12.9□□□□□ -0.34
TRAIP-209ENST00000488860 BRWD1Q9NSI6 2320 aa12.9□□□□□ -0.34
TRAIP-209ENST00000488860 CLUHO75153 1309 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 DOCK8Q8NF50 2099 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 TCRBV5S1A1TA0A578 114 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 ZNF840PA6NDX5 716 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 TMEM110-MUSTN1A8MSY1 372 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 NRG2O14511 850 aaPredicted RBP12.89□□□□□ -0.35
TRAIP-209ENST00000488860 ZNF197O14709 1029 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 MDM4O15151 490 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 TLR5O60602 858 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 F11P03951 625 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 GLI1P08151 1106 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 RARGP13631 454 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 CEBPBP17676 345 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 KCNA5P22460 613 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 FSHRP23945 695 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 DEKP35659 375 aaKnown RBP12.89□□□□□ -0.35
TRAIP-209ENST00000488860 SCNN1AP37088 669 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 NOP2P46087 812 aaKnown RBP12.89□□□□□ -0.35
TRAIP-209ENST00000488860 PSEN1P49768 467 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 SULT1E1P49888 294 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 EPHA5P54756 1037 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 NAP1L1P55209 391 aaKnown RBP12.89□□□□□ -0.35
TRAIP-209ENST00000488860 RPL7AP62424 266 aaKnown RBP12.89□□□□□ -0.35
TRAIP-209ENST00000488860 YWHAZP63104 245 aaKnown RBP12.89□□□□□ -0.35
TRAIP-209ENST00000488860 ITIH3Q06033 890 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 KIF5AQ12840 1032 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 MAMLD1Q13495 774 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 COL19A1Q14993 1142 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 TEAD2Q15562 447 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 ARHGAP15Q53QZ3 475 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 DCAF6Q58WW2 860 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 STXBP5Q5T5C0 1151 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 GPR158Q5T848 1215 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 GAREM2Q75VX8 874 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 TMEM150AQ86TG1 271 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 RHOT2Q8IXI1 618 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 BTBD6Q96KE9 485 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 MSLNLQ96KJ4 702 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 RIPOR3Q96MK2 946 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 ADAM7Q9H2U9 754 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 CCSER2Q9H7U1 834 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 OSGEPQ9NPF4 335 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 LZTFL1Q9NQ48 299 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 ABCC13Q9NSE7 274 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAIP-209ENST00000488860 RASAL2Q9UJF2 1139 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 NAALADL1Q9UQQ1 740 aa12.89□□□□□ -0.35
TRAIP-209ENST00000488860 SYNJ2BP-COX16A0A087WUM0 186 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 MACROD2A1Z1Q3 448 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 C2orf78A6NCI8 922 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 SIGLEC16A6NMB1 481 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 BUB1O43683 1085 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 ZDHHC11BP0C7U3 371 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 DESP17661 470 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 GPD1P21695 349 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 PSMA2P25787 234 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 RFC1P35251 1148 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-209ENST00000488860 FLT3P36888 993 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 PPP3CCP48454 512 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 EFEMP1Q12805 493 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 CDO1Q16878 200 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 ARHGAP29Q52LW3 1261 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 PRSS36Q5K4E3 855 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 ATAT1Q5SQI0 421 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 C10orf120Q5SQS8 335 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 PPP1R15BQ5SWA1 713 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 HECTD3Q5T447 861 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 TXNDC8Q6A555 127 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 TRNP1Q6NT89 227 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 MAB21L3Q8N8X9 362 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 MAFAQ8NHW3 353 aaPredicted RBP12.88□□□□□ -0.35
TRAIP-209ENST00000488860 ITFG1Q8TB96 612 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 SLC35G2Q8TBE7 412 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 ADAM32Q8TC27 787 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 RXFP2Q8WXD0 754 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 CFAP57Q96MR6 1250 aa12.88□□□□□ -0.35
TRAIP-209ENST00000488860 SLC2A13Q96QE2 648 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms