RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 CDK5RAP1Q96SZ6 601 aaKnown RBP19.57■□□□□ 0.72
PTCD3-217ENST00000488801 SYT11Q9BT88 431 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 KLF16Q9BXK1 252 aaPredicted RBP19.57■□□□□ 0.72
PTCD3-217ENST00000488801 EDEM3Q9BZQ6 932 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 HPS4Q9NQG7 708 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 IFNKQ9P0W0 207 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 TJP2Q9UDY2 1190 aa19.57■□□□□ 0.72
PTCD3-217ENST00000488801 PRR33A8MZF0 331 aa19.56■□□□□ 0.72
PTCD3-217ENST00000488801 ZNF263O14978 683 aa19.56■□□□□ 0.72
PTCD3-217ENST00000488801 LSM8O95777 96 aaKnown RBP19.56■□□□□ 0.72
PTCD3-217ENST00000488801 LCP1P13796 627 aa19.56■□□□□ 0.72
PTCD3-217ENST00000488801 NOMO3P69849 1222 aa19.56■□□□□ 0.72
PTCD3-217ENST00000488801 MLF2Q15773 248 aaPredicted RBP19.56■□□□□ 0.72
PTCD3-217ENST00000488801 PTPN20Q4JDL3 420 aa19.56■□□□□ 0.72
PTCD3-217ENST00000488801 CWF19L1Q69YN2 538 aaKnown RBP19.56■□□□□ 0.72
PTCD3-217ENST00000488801 MSANTD2Q6P1R3 559 aa19.56■□□□□ 0.72
PTCD3-217ENST00000488801 OSCP1Q8WVF1 389 aa19.56■□□□□ 0.72
PTCD3-217ENST00000488801 ZFYVE19Q96K21 471 aa19.56■□□□□ 0.72
PTCD3-217ENST00000488801 ITIH6Q6UXX5 1313 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 FAM86C2PA6NEL3 165 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 PIK3R2O00459 728 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 PDGFBP01127 241 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-217ENST00000488801 CYP1A1P04798 512 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-217ENST00000488801 FYNP06241 537 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 MMEP08473 750 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 RALAP11233 206 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 KRT9P35527 623 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 ATP5C1P36542 298 aaKnown RBP19.55■□□□□ 0.72
PTCD3-217ENST00000488801 STARD6P59095 220 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 CDR2Q01850 454 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 EML3Q32P44 896 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 BSPRYQ5W0U4 402 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 E4F1Q66K89 784 aaPredicted RBP19.55■□□□□ 0.72
PTCD3-217ENST00000488801 BEND5Q7L4P6 421 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 RNF214Q8ND24 703 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 WBP2Q969T9 261 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 CHFRQ96EP1 664 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 PIWIL1Q96J94 861 aaKnown RBP19.55■□□□□ 0.72
PTCD3-217ENST00000488801 XPO4Q9C0E2 1151 aaKnown RBP19.55■□□□□ 0.72
PTCD3-217ENST00000488801 SMPD4Q9NXE4 827 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 NUDT5Q9UKK9 219 aa19.55■□□□□ 0.72
PTCD3-217ENST00000488801 A0A1W2PQJ5 194 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 E2F8A0AVK6 867 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 MDM4O15151 490 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 SART1O43290 800 aaKnown RBP19.54■□□□□ 0.72
PTCD3-217ENST00000488801 LTFP02788 710 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 GABRB2P47870 512 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 PRKCQQ04759 706 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 PDGFRLQ15198 375 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 SLC44A4Q53GD3 710 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 C10orf120Q5SQS8 335 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 TAF3Q5VWG9 929 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 CACNA2D4Q7Z3S7 1137 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 IRF2BP2Q7Z5L9 587 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 TADA2BQ86TJ2 420 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 YAF2Q8IY57 180 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 SIX5Q8N196 739 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 TMEM35BQ8NCS4 154 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 PPP1R13BQ96KQ4 1090 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 ST7Q9NRC1 585 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 HEBP1Q9NRV9 189 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 ABCC13Q9NSE7 274 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 THG1LQ9NWX6 298 aaKnown RBP19.54■□□□□ 0.72
PTCD3-217ENST00000488801 CFAP97Q9P2B7 532 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 DNMT3LQ9UJW3 386 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 FBXL21Q9UKT6 434 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 CA14Q9ULX7 337 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 MUC6Q6W4X9 2439 aa19.54■□□□□ 0.72
PTCD3-217ENST00000488801 OTOL1A6NHN0 477 aaPredicted RBP19.53■□□□□ 0.72
PTCD3-217ENST00000488801 LRRC53A6NM62 1247 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 ERBB2P04626 1255 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 GLULP15104 373 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 FERP16591 822 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 TNK2Q07912 1038 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 TMEM31Q5JXX7 168 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 TRIM68Q6AZZ1 485 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 SARM1Q6SZW1 724 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 OLFML1Q6UWY5 402 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 Q6ZNB5 142 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 SCUBE3Q8IX30 993 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 ZNF687Q8N1G0 1237 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 IQCDQ96DY2 449 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 NOX5Q96PH1 765 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 GKN1Q9NS71 199 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 OLA1Q9NTK5 396 aaKnown RBP19.53■□□□□ 0.72
PTCD3-217ENST00000488801 ASNSD1Q9NWL6 643 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 GTSE1Q9NYZ3 720 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 AIPL1Q9NZN9 384 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 CEP83Q9Y592 693 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 WNT6Q9Y6F9 365 aa19.53■□□□□ 0.72
PTCD3-217ENST00000488801 CACNA1HO95180 2353 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 ARSAP15289 507 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 PRKCIP41743 596 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 BTBD8Q5XKL5 378 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 TRIM72Q6ZMU5 477 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 FAM183BPQ6ZVS7 135 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 HTR3DQ70Z44 454 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 GAS2L3Q86XJ1 694 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 FMNL3Q8IVF7 1028 aa19.52■□□□□ 0.72
PTCD3-217ENST00000488801 ZNF397Q8NF99 534 aaPredicted RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms