RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 RAB41Q5JT25 222 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 KLHDC10Q6PID8 442 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 TADA2BQ86TJ2 420 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 LONP2Q86WA8 852 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 MIB1Q86YT6 1006 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 RBBP8NLQ8NC74 664 aaPredicted RBP18.66■□□□□ 0.58
ITGB1-215ENST00000488494 RUBCNQ92622 972 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 MED15Q96RN5 788 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 UBXN6Q9BZV1 441 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 NCDNQ9UBB6 729 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 DNMT3LQ9UJW3 386 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 LSM7Q9UK45 103 aaKnown RBP18.66■□□□□ 0.58
ITGB1-215ENST00000488494 SLC8A2Q9UPR5 921 aa18.66■□□□□ 0.58
ITGB1-215ENST00000488494 GREM1O60565 184 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 PAEPP09466 180 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 RALAP11233 206 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 BRD2P25440 801 aaKnown RBP18.65■□□□□ 0.58
ITGB1-215ENST00000488494 TKTL1P51854 596 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 GCNT1Q02742 428 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 ADIGQ0VDE8 80 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 MESP2Q0VG99 397 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 LPAL2Q16609 132 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 DPCR1Q3MIW9 517 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 SFTPA1Q8IWL2 248 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 MLKLQ8NB16 471 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 UBA3Q8TBC4 463 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 TFAP2BQ92481 460 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 ACDQ96AP0 544 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 HHIPQ96QV1 700 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 ULBP1Q9BZM6 244 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 NUP62CLQ9H1M0 184 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 CLIC5Q9NZA1 410 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 RASAL2Q9UJF2 1139 aa18.65■□□□□ 0.58
ITGB1-215ENST00000488494 EP300Q09472 2414 aaPredicted RBP18.64■□□□□ 0.58
ITGB1-215ENST00000488494 M0QYV0 167 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 HOXC11O43248 304 aaPredicted RBP18.64■□□□□ 0.57
ITGB1-215ENST00000488494 ZBED1O96006 694 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 CALCAP01258 141 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 SETSIPP0DME0 302 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 HOXA6P31267 233 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 EIF2DP41214 584 aaKnown RBP18.64■□□□□ 0.57
ITGB1-215ENST00000488494 PLA2G4AP47712 749 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 SLC6A11P48066 632 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 PXNP49023 591 aaPredicted RBP18.64■□□□□ 0.57
ITGB1-215ENST00000488494 YWHAGP61981 247 aaKnown RBP eCLIP18.64■□□□□ 0.57
ITGB1-215ENST00000488494 GAD2Q05329 585 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 PRR23BQ6ZRT6 265 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 HTR3DQ70Z44 454 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 WDR5BQ86VZ2 330 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 CREBRFQ8IUR6 639 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 ARHGAP18Q8N392 663 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 DCLK2Q8N568 766 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 KREMEN1Q96MU8 473 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 CDK5RAP1Q96SZ6 601 aaKnown RBP18.64■□□□□ 0.57
ITGB1-215ENST00000488494 ARHGEF4Q9NR80 690 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 SPHK2Q9NRA0 654 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 KIAA1257Q9ULG3 409 aa18.64■□□□□ 0.57
ITGB1-215ENST00000488494 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.64■□□□□ 0.57
ITGB1-215ENST00000488494 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.63■□□□□ 0.57
ITGB1-215ENST00000488494 K7EQS6 105 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 RNF225M0QZC1 329 aaPredicted RBP18.63■□□□□ 0.57
ITGB1-215ENST00000488494 KAT7O95251 611 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 ZNF132P52740 706 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 EFEMP1Q12805 493 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 DMC1Q14565 340 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 ANO4Q32M45 955 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 C2orf27AQ580R0 203 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 BTBD8Q5XKL5 378 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 LCLAT1Q6UWP7 414 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 CLEC17AQ6ZS10 378 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 RSRC2Q7L4I2 434 aaKnown RBP18.63■□□□□ 0.57
ITGB1-215ENST00000488494 BHLHA9Q7RTU4 235 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 TMEM25Q86YD3 366 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 ETFBKMTQ8IXQ9 262 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 SIX6OS1Q8N1H7 587 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 CCDC26Q8TAB7 109 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 USP33Q8TEY7 942 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 NDRG1Q92597 394 aaKnown RBP18.63■□□□□ 0.57
ITGB1-215ENST00000488494 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
ITGB1-215ENST00000488494 PNKPQ96T60 521 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 ZSWIM1Q9BR11 485 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 CRACR2AQ9BSW2 395 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 LRRC4Q9HBW1 653 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 RAB23Q9ULC3 237 aa18.63■□□□□ 0.57
ITGB1-215ENST00000488494 ANTXRLA6NF34 631 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 NEDD8-MDP1E9PL57 170 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 HRO43593 1189 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 STC2O76061 302 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 APODP05090 189 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 HMBSP08397 361 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 KRT5P13647 590 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 SIM2Q14190 667 aaPredicted RBP18.62■□□□□ 0.57
ITGB1-215ENST00000488494 PKDCCQ504Y2 493 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 Q6ZNB5 142 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 SYT13Q7L8C5 426 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 IRF2BP1Q8IU81 584 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 KIAA2013Q8IYS2 634 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 ZNF276Q8N554 614 aa18.62■□□□□ 0.57
ITGB1-215ENST00000488494 NAT16Q8N8M0 369 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms